OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [S:0311] and [T:0314]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-0.1	-0.3	0.2	-0.2	0	0.6	-0.8	-0.1	0.1	-0.1	0.5	0	-0.1	0.1	0	-0.3	-0.3	0	1
F	0.3	-0.3	-0.1	-0.5	0	-0.3	-0.4	0.2	-0.3	0	0	-0.3	-0.1	-0.2	-0.2	0.7	1.1	0.4	-0.1	0.1
I	0.4	-0.2	-0.1	0.1	-0.1	-0.3	-0.6	0.3	-0.2	-0.2	0	-0.2	-0.1	-0.2	0	0.1	0.1	0.7	-0.1	0.6
L	0.5	-0.3	-0.3	-0.1	0.2	0.1	0.4	-0.3	-0.3	0.3	0.2	-0.1	0	-0.2	0.1	0	0.1	0.8	-0.1	-0.3
V	0.4	-0.3	-0.1	0.3	0.1	-0.1	-0.9	0	-0.2	0.3	-0.2	0.8	-0.2	0.1	-0.1	0	0.4	0	0.1	-0.3
M	0.1	0.4	0	0.2	0.2	0.1	0.1	-0.4	-0.2	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	0.4	0.3	-0.3	-0.1	-0.2
W	0.1	-0.6	-0.5	-0.3	-0.5	0.1	-0.6	0.2	0.1	-0.1	0.1	-0.1	-0.2	-0.1	-0.1	0.7	0.4	0.7	0.2	0
Y	-0.3	-0.5	0	0.1	-0.2	-0.3	-0.5	0.2	-0.1	0	-0.3	-0.1	-0.1	0.6	0	0.4	0.4	0.3	-0.1	0.4
D	-0.2	0.6	0.3	-0.5	0.3	-0.2	1.8	0.2	0.4	-0.1	-0.1	0.3	-0.1	-0.1	-0.1	-1.3	-0.1	-0.8	0.2	-0.4
E	-0.8	0.2	0.3	0.1	0.3	0	0.5	1.2	-0.2	-0.1	0.6	0.2	0	-0.1	-0.1	-0.6	-0.4	-0.7	-0.1	0.1
K	-0.3	0.5	0.5	0.3	0.1	0	-0.1	0.5	-0.2	0.1	0.1	-0.1	-0.3	-0.2	-0.1	0	-0.2	-0.1	-0.1	-0.2
R	-0.2	0.1	0	0.1	-0.3	0.1	0.1	-0.3	1	-0.3	-0.1	0.2	0	-0.1	0.2	0.3	0.2	-0.6	-0.1	-0.2
H	-0.1	-0.1	0	-0.2	-0.1	-0.2	-0.2	-0.2	0.4	0.1	0.1	-0.2	0.3	0.3	-0.1	0.1	-0.3	-0.1	-0.1	0.2
N	-0.2	0.3	0.2	0.2	-0.1	-0.1	0.4	-0.1	0.1	-0.1	-0.1	-0.1	0.1	0.7	-0.1	0.3	-0.3	-0.6	-0.1	-0.1
Q	-0.4	-0.5	0	-0.1	0	0.3	-0.5	0.3	-0.3	-0.2	0	0.2	0.3	-0.1	-0.2	-0.1	-0.1	0.3	-0.1	0.4
S	0.1	0.3	0.1	0.3	0.2	-0.2	0.2	-0.2	0	0	-0.2	-0.3	0.2	-0.1	0.5	0	0.4	-0.1	-0.1	-0.2
T	-0.1	0.4	0.1	-0.1	0.1	0.2	0.1	0.3	-0.3	0	0.2	-0.2	0	-0.3	0	0.2	0.2	-0.4	0	-0.5
G	0.8	-0.1	-0.4	0.5	0.5	0.4	0.2	-0.1	-0.2	-0.1	-0.1	-0.1	0.1	-0.1	0	-0.2	-0.2	0.2	0.4	-0.1
P	0.2	-0.2	0.9	0.6	0.6	0.6	-0.2	-0.7	-0.1	0	-0.1	0.1	-0.1	-0.1	0	-0.6	-1.3	-0.1	0	-0.5
C	0.4	0.3	0.1	-0.1	0	-0.1	0.3	0	-0.1	-0.1	-0.1	-0.1	0.4	-0.1	-0.1	-0.5	-0.2	-0.2	-0.1	0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0311	0.2	0.2	0.3	0.9	0.5	-0.1	-1.3	-0.1	-0.3	-0.1	-0.2	0.3	-0.2	0	-0.7	0.6	0.2	0.5	-0.7	-0.5
0314	1.1	0.8	1.4	1.5	1.7	0.2	-0.3	0.6	-1	-0.9	-0.8	-0.6	-0.7	-0.8	-0.9	-0.8	0	0.1	-1.1	0.8

Select residue pair below:

i_j	Score	Prob
0296_0314	1.476	1.00
0280_0314	1.126	0.97
0314_0325	0.787	0.74
0314_0324	0.700	0.61
0311_0314	0.611	0.46
0303_0314	0.530	0.32

Local Interactions:

i_j	Score	Prob
0314_0315	2.614	1.00
0313_0314	1.235	0.98
0312_0314	0.816	0.77

See all coupling residues
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