OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [L:0308] and [S:0311]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.3	-0.4	0.1	0	-0.3	0	-0.1	-0.4	-0.1	0	0.4	0.2	0.2	-0.1	0.1	-0.3	0.1	0.2	0.1
F	0	0	0.2	-0.3	0.3	0.6	-0.8	-0.5	0.3	0.3	0	-0.1	0.1	0.4	0	-0.6	-0.8	1.4	0.3	-0.4
I	-0.2	-0.1	-0.1	0.2	-0.5	-0.1	0.2	-0.5	0.6	0.4	0.3	-0.7	-0.1	0	0	0.2	-0.2	-0.8	1	-0.1
L	-0.2	-0.1	0.6	0.2	0.5	-0.6	-0.1	-0.5	0.5	0	-0.5	-0.1	-0.4	-0.3	-0.1	0.2	-0.3	0	1	-0.2
V	0.6	-0.1	0.1	-0.2	0	-0.3	-0.3	-0.4	0	0.3	-0.4	0	-0.7	0	-0.1	0.6	0.2	-0.2	0.3	0
M	-0.4	-0.7	0.1	0.5	0	0.1	-0.1	-0.1	0	-0.4	-0.1	-0.2	0.3	0.2	-0.6	0.1	0.7	0	0.1	-0.2
W	-0.3	-0.6	-0.6	0.1	0.2	0.1	-0.3	-0.4	-0.2	-0.3	-0.1	0.2	-0.2	-0.2	-0.3	-0.3	-0.3	2.3	-0.2	-0.1
Y	-0.6	0	0.2	-0.2	0.6	0	-0.7	-0.3	0.1	0.6	0.1	-0.4	0.6	0.2	-0.6	-0.3	0.1	0.5	-0.1	0.2
D	-0.1	-0.2	0.1	0.2	0.1	0	0.6	0.1	-1.7	0.2	0.3	0.6	0.4	-0.2	0.2	0.3	0.7	0	-0.9	0.3
E	-0.2	-0.2	0.2	0.3	0.2	0	0.1	-0.1	-0.4	0	0.3	0.3	-0.1	0.1	-0.3	-0.5	0.1	0.3	-0.2	0.5
K	0	-0.1	0.1	0	0	0.4	-0.1	0.2	0.1	-0.2	0.1	0.4	0.1	-0.1	1	-0.2	0	-0.1	-0.6	-0.6
R	0.6	0.5	-0.1	0.1	-0.1	-0.1	0	0.3	0.8	-0.6	-0.2	-0.2	-0.2	-0.2	0.8	-0.1	-0.3	-0.2	-0.5	0.5
H	-0.2	0.3	0.2	0.2	0.1	0.7	-0.2	0.3	-0.4	0.3	-0.5	-0.5	-0.2	-0.2	0.5	0.5	0.2	-0.3	-0.6	-0.6
N	0	0.2	0.5	0.2	0.1	0	0.6	0.4	-0.3	-0.2	-0.2	-0.5	0.3	-0.1	0.1	-0.1	-0.3	-0.5	-0.5	0.4
Q	0.1	0.1	-0.3	0	0	0.2	-0.4	0.2	0.6	-0.1	0.1	0.2	-0.2	-0.4	0.1	0.4	-0.1	-0.1	0	0.1
S	0.3	0.4	0	0.1	-0.1	-0.3	0.3	0.2	0.1	0.2	-0.3	0.3	0.3	-0.1	0.2	-0.3	-0.3	-0.8	0.1	0
T	0.4	0.6	0	-0.2	-0.3	-0.4	0.5	0.4	-0.3	-0.2	-0.2	0.1	-0.1	0.2	-0.5	-0.2	-0.2	-0.1	0.5	0
G	-0.1	0.2	-0.3	0	-0.3	0.2	0.5	0.2	-0.1	-0.1	0.1	0.2	0.4	0	-0.3	-0.1	-0.1	-0.1	0.2	-0.2
P	0.1	-0.6	-0.2	0.2	0	-0.1	-0.3	-0.3	-0.4	0	0.2	0.1	0.1	0.2	0.3	0.1	0.6	-0.4	0.1	-0.5
C	0.1	0.1	-0.1	-0.2	-0.4	-0.1	0.1	1	0.4	0.2	0.1	0	-0.4	-0.1	-0.6	0.1	-0.2	-0.6	-0.3	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0308	0.3	-0.4	-0.6	-0.3	-0.1	-1.6	-2.8	-0.7	1.3	0.5	0.7	0.5	-0.1	1	0.4	1.1	0.6	0.7	0	-1
0311	0.2	0.2	0.3	0.9	0.5	-0.1	-1.3	-0.1	-0.3	-0.1	-0.2	0.3	-0.2	0	-0.7	0.6	0.2	0.5	-0.7	-0.5

Select residue pair below:

i_j	Score	Prob
0306_0311	0.930	0.88
0311_0324	0.673	0.56
0311_0314	0.611	0.46
0311_0326	0.600	0.44
0308_0311	0.599	0.43
0270_0311	0.568	0.38

Local Interactions:

i_j	Score	Prob
0310_0311	1.195	0.98
0311_0313	0.780	0.73
0311_0312	0.552	0.36

See all coupling residues
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