OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [W:0305] and [L:0312]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0.2	0.1	0.1	0.1	-0.4	-0.3	-0.5	-0.2	-0.1	0.7	0.4	0.4	0.1	0.1	0.5	0.3	-0.3	-0.1	-0.7
F	-0.6	0.4	0.3	0.6	0	0.1	0	0.7	-0.2	0	0	0.1	-0.5	0.1	0.6	-0.3	0.1	0.1	-0.8	0.6
I	0.2	-0.1	0.7	0.1	0.2	0.4	0.2	0.2	-0.3	0	0	0.3	-0.1	-0.3	-0.4	-0.3	0.1	-0.6	0	0
L	0.3	-0.2	-0.1	0.5	0.1	0.5	1.1	0.1	-0.3	-0.4	-0.3	-0.3	0	-0.3	0	-0.3	0.1	0.2	0.2	-0.4
V	0.2	0	0.5	0.1	0.4	0.3	0.5	0.8	0	-0.3	-0.5	-0.1	0.3	-0.3	-0.4	-0.3	-0.3	-0.4	-0.3	0.1
M	0.3	-0.2	0.3	0.1	0.2	-0.3	0.1	0.1	-0.1	-0.2	0.3	-0.1	-0.2	-0.2	0.5	-0.1	-0.5	-0.3	-0.1	0.6
W	-0.5	-0.3	-0.2	0.2	-0.4	0.1	-1	-0.8	0.6	0.7	1	-0.1	0	0.9	0.4	0	0.4	-0.1	0.4	0.4
Y	-0.2	0.2	0.6	0.7	0.2	0	-0.5	0.6	-0.1	0	-0.4	-0.5	-0.4	-0.2	0.1	-0.1	-0.3	0.7	0	0.2
D	0.2	-0.4	0	-0.3	0	0.3	-0.2	-0.2	0	0	0.2	-0.1	0	0	-0.1	0.7	0.1	-0.1	0	-0.1
E	0.8	-0.5	-0.2	-0.5	0	0.3	0.4	-0.3	0	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	0	0	0	0.2	0.1
K	-0.3	0.9	-0.2	0.2	-0.5	-0.4	-0.2	0.1	0	-0.1	-0.1	-0.1	-0.1	0	-0.1	0.1	-0.2	-0.1	0.1	-0.1
R	-0.3	-0.1	0.4	0.1	0.6	-0.1	0.1	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	0.1	-0.2	0	-0.1	0	-0.2
H	0.7	0.8	-0.3	-0.1	-0.2	-0.1	-0.1	0.2	0.1	0.1	-0.2	0.4	0.1	-0.1	-0.3	-0.1	-0.5	-0.2	-0.1	-0.1
N	-0.2	0	-0.1	-0.1	-0.1	-0.3	-0.1	-0.2	0	0	0.2	-0.1	0	0	-0.1	0.2	-0.1	-0.1	0	-0.1
Q	-0.2	-0.3	-0.2	-0.1	0.8	1.3	-0.1	-0.4	0	-0.1	-0.2	-0.2	-0.1	-0.1	-0.2	-0.3	-0.1	-0.1	0.1	-0.1
S	0.4	0.3	0	0.1	-0.1	-0.1	-0.4	-0.7	-0.2	0	-0.1	0.5	0.1	-0.2	-0.1	-0.1	0.3	-0.1	-0.1	0.7
T	0.4	-0.3	0.6	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	-0.2	0	-0.1	-0.2	-0.4	0.4	0.7	0.2	-0.1	-0.3
G	-0.1	-0.1	0.1	-0.3	0.3	0.1	0.1	-0.1	0	-0.1	-0.1	-0.2	0.3	-0.1	-0.1	0.2	0.1	-0.1	0	-0.1
P	-0.1	0.6	-0.2	0	0	-0.7	-0.2	0.3	-0.1	-0.1	-0.2	0.1	0.1	0	-0.3	0.5	-0.2	-0.1	0	-0.2
C	-0.1	-0.3	0.1	-0.1	0.2	-0.1	-0.3	0	-0.1	-0.2	-0.3	0.2	-0.1	0.3	0.2	0.1	0.2	0.7	-0.1	-0.4

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0305	0.7	0.8	0.7	1.1	1	-0.1	0.3	0.5	-0.9	-0.4	-0.4	-0.6	-0.3	-0.8	-0.6	0.8	0.2	-0.2	-0.3	0.1
0312	0.7	1.2	1.9	2.2	2.1	0.8	-0.9	0.1	-1.9	-1.4	-0.9	-0.3	-0.7	-1.2	-1.1	0.5	-0.2	-1.1	-1.2	-0.4

Select residue pair below:

i_j	Score	Prob
0272_0305	2.214	1.00
0264_0305	1.483	1.00
0265_0305	0.941	0.89
0262_0305	0.784	0.73
0270_0305	0.699	0.60
0305_0312	0.673	0.56
0305_0327	0.654	0.53
0282_0305	0.597	0.43

Local Interactions:

i_j	Score	Prob
0303_0305	0.685	0.58
0304_0305	0.624	0.48
0305_0306	0.565	0.38

See all coupling residues
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