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Coupling matrix for [R:0301] and [D:0302]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0.1 0.2 0.7 0.1 -0.3 -0.1 0 -0.1 0 0.3 0.1 -0.1 -0.4 -0.1 0.1 -0.3 0.3 0.2 -0.1
F -0.2 0 -0.6 -0.2 -0.4 -0.5 0.6 -0.5 0.9 1.3 -0.1 0.1 -0.7 0.6 0.3 0.2 0.1 0 -0.1 -0.2
I -0.2 -0.8 -0.2 -0.7 -0.1 -0.5 -0.5 0 -0.1 -0.3 0.4 0.2 -0.2 0.4 1 0.6 -0.1 0.5 0.8 -0.1
L -0.2 0.5 -0.3 -0.4 -0.6 -0.4 0.2 1.1 0.9 0 -0.1 -0.4 0.9 0.2 0.1 0 -0.4 -0.1 -0.7 0.2
V 0.1 -0.4 -0.2 -0.3 -0.1 -0.1 -0.1 0.1 0.3 0.1 0.9 0.5 0.1 -0.3 0.2 0.1 -0.3 0.3 -0.2 -0.3
M 0.1 0.2 -0.1 -0.5 -0.3 0.5 -0.3 -0.4 1.2 -0.2 -0.4 -0.7 -0.2 0.2 0.5 0.3 0 0.3 -0.3 0.3
W 0.8 -0.8 0.7 -0.3 0.4 0 -0.5 -0.7 0.6 -0.6 -0.2 -0.1 -1.2 -0.3 -0.5 0.5 0.6 0.2 -0.6 0.3
Y 0 -0.2 -0.5 -0.3 -0.5 0.8 -0.1 -0.7 0.4 0.4 0.1 0.1 0.1 -0.2 1 0.1 0 0.1 -0.5 -0.2
D -0.1 -0.1 0.2 0.6 -0.1 0.1 0.4 -0.3 -0.4 -0.1 -0.6 0.4 0.1 0 -0.4 -0.2 0.3 0 -0.2 -0.1
E -0.2 0.1 -0.4 -0.2 0.5 0 -0.3 0.5 -0.7 0.4 0.2 1 0 0.3 0 -0.3 0.4 -0.3 0 -0.7
K -0.6 0.1 0.3 0.5 -0.4 0.3 -0.1 -0.3 -1 0.7 0.1 0.6 0.3 -0.1 -0.3 -0.1 0.2 -0.5 -0.4 0.6
R 0.1 0.3 0 -0.4 0.4 0.2 0.8 0.4 0.5 -0.1 -1 -0.3 0.1 -0.3 0.2 0 0.1 -0.3 -0.1 0.1
H -0.2 -0.2 0.5 0.9 -0.1 0.1 0.1 -0.1 -0.2 0.3 -0.5 0.2 0.3 -0.4 -0.3 -0.1 0.1 -0.1 -0.4 0.4
N 0 0.6 -0.2 -0.3 0 0.1 -0.1 0.1 0.2 0 0.4 -0.1 -0.1 -0.1 -0.3 0.1 0.3 0.2 -0.2 0.3
Q 0.3 0.1 0.2 -0.2 0 0.1 -0.3 0.6 0.2 0 -0.3 -0.3 -0.1 0 0 0.1 0.5 -0.4 0 -0.1
S 0.2 0 -0.5 0.1 0.1 -0.3 -0.1 0.1 0.1 -0.2 0.2 -0.3 0.2 -0.1 0.2 0 0 -0.2 0.6 0.3
T 0.4 -0.2 -0.3 -0.3 0.3 -0.2 -0.4 -0.2 0.4 -0.7 0.3 -0.1 0.9 1 0 0.2 -0.1 0.1 -0.1 0.4
G 0.2 0.5 0.1 0.1 0.3 -0.1 -0.3 -0.5 -0.3 -0.1 -0.2 -0.1 0.3 -0.3 -0.4 -0.6 -0.3 0.2 2 -0.5
P 0.3 0.2 0.6 0.8 0.4 0 -0.2 0.9 -1.4 -0.4 -0.1 0.5 0 0 -0.2 -0.5 -0.7 -0.3 0 -0.1
C 0.2 -0.2 -0.1 0.2 0 -0.2 0.7 -0.5 0.2 -0.2 0 -0.4 -0.2 -0.3 0.1 0.3 -0.3 0.4 -0.2 0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0301 0.1 0 0 0.7 0.4 -0.3 -0.4 0.1 -0.7 -0.4 -0.3 0.8 -0.3 0.5 -0.1 1 1.4 0 -0.7 -0.7
0302 1 -0.4 -0.4 -0.1 0 -1 -1.3 -1.1 0.8 0.2 0 0.6 -0.2 0.1 0.4 1.5 0.8 1 -1.1 0.5
Select residue pair below:
i_j Score Prob
0302_0316 2.039 1.00
0260_0302 0.885 0.85
0302_0315 0.534 0.33
Local Interactions:
i_j Score Prob
0302_0304 1.009 0.93
0302_0303 0.566 0.38
0301_0302 0.544 0.35
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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