OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [S:0293] and [Q:0294]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.4	0.3	0	-0.2	-0.1	-0.1	0.7	0.1	-0.3	0.2	0.1	-0.1	-0.1	0	0.3	0.1	0.4	-0.3	-0.6
F	0.1	-0.6	-0.4	-0.7	-0.2	-0.5	0.7	-0.3	0.7	0.7	0.3	0.3	0.2	0	0.2	0.2	0.1	-0.2	0.1	0.2
I	0.3	0.1	-0.8	-0.4	-0.7	-0.8	-0.5	-0.5	0.8	0.8	0.7	-0.2	-0.2	0.5	0.3	0.1	0.1	0.2	0.6	0.6
L	0.3	-0.7	-0.7	-0.8	-0.1	-0.8	0.6	-0.5	0.6	0.7	0.1	0.3	0.2	0	0.1	0.4	0.5	0.1	0.8	0.2
V	0.8	-0.4	0.2	0.6	-0.3	-0.2	-0.4	0.4	-0.2	0	0.4	0.5	-0.3	-0.5	0	-0.3	-0.2	0.3	0.5	0.5
M	0.1	-0.2	-0.9	-0.6	-0.1	-0.4	-0.4	-0.4	0.6	0.5	0.4	0.4	0.1	0	0	0.4	0.4	0.1	0.4	0.1
W	-0.4	0	-0.4	-0.5	-0.5	0.9	-0.3	-0.2	-0.4	-0.3	0.8	1.3	0.7	-0.4	0.7	-0.7	-0.1	-0.4	-0.1	0.3
Y	-0.3	-0.6	0	0.1	-0.1	0.6	-0.5	0.1	-0.1	0	-0.2	0	0.4	0	0.4	0.1	0	0.5	0.7	-0.6
D	-0.2	0	-0.2	0.6	-0.2	0	0.1	-0.1	0.3	0.4	-0.1	0.6	0.2	0.4	-0.4	-0.2	-0.2	-0.4	-0.3	-0.3
E	-0.1	0.2	0.4	0.5	0.2	0	0.2	0.4	-0.4	-0.4	0.3	0.2	-0.2	0	-0.1	-0.5	-0.1	-0.2	0	-0.5
K	-0.2	0	0.1	-0.1	-0.1	0.1	0	0.3	0.2	0.3	-0.7	0.2	0	0.6	-0.6	-0.4	0	0.4	0	-0.2
R	-0.4	0.4	0	0.6	-0.1	-0.2	-0.2	0.6	0.3	-0.4	-0.4	0.4	0.3	-0.1	0.5	-0.4	0.3	-0.2	-0.2	-0.3
H	0	0.1	-0.2	-0.1	-0.8	0	-0.1	-0.2	0.8	-0.2	0.3	-0.2	0	-0.4	0.6	0.9	0	0.1	-0.5	-0.2
N	0.4	0.1	0.8	-0.3	0.6	0.8	-0.1	-0.4	-0.2	-0.5	-0.3	-0.2	-0.3	0.2	-0.3	-0.6	0	0.1	-0.5	-0.1
Q	-0.2	0.1	0.1	0	0.1	-0.7	0	0.3	-0.4	0.1	0	-0.2	0	0.2	-0.2	0.5	0.3	-0.1	0.2	-0.2
S	-0.1	0.6	0.8	0	0.5	0.5	-0.4	0.2	-0.5	-0.1	-0.4	-0.5	-0.1	0.6	-0.1	0.1	-0.7	0.4	-0.5	0.1
T	-0.3	0.2	1.2	0.7	0.5	0.4	-0.2	0.6	0	-0.6	-0.5	-0.7	-0.5	-0.1	-0.8	-0.5	-0.4	0.1	0.1	0.9
G	-0.1	-0.1	-0.2	-0.6	0.3	-0.1	-0.4	-0.7	0.3	0.2	0	-0.3	-0.3	0	1	0.4	0.1	0.1	-0.5	0.1
P	-0.1	0	0.2	1.1	0.5	0	0.8	0.4	-0.7	-0.5	-0.2	-0.3	0.3	0.1	-0.1	-0.2	-0.2	-0.3	-0.5	-0.1
C	0.1	0.7	-0.2	-0.1	0.2	0.2	-0.4	-0.4	0	0.2	0.1	-0.4	-0.4	-0.3	-0.4	1	0.5	-0.6	-0.6	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0293	0.1	1	1	1.8	0.9	-0.4	-1	0.2	-0.6	-0.1	-0.3	-0.1	-0.5	-0.6	-0.4	0.5	0.2	-0.3	-0.2	-0.6
0294	0.1	0.1	0.4	0.8	0.2	-0.7	-2.6	-0.4	0.3	0.3	0.8	0.6	-0.2	0.2	0.4	0.6	0.3	0.3	0.1	-1.4

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0293_0294	1.127	0.97
0294_0295	0.814	0.77
0292_0294	0.761	0.70

See all coupling residues
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