OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [F:0291] and [S:0293]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.1	-0.1	0.6	-0.1	0.5	0.2	0.2	-0.2	0.3	-0.7	0.1	0.5	0	0	-0.4	-0.4	0.1	0	0.1
F	0.6	-0.5	-0.6	-0.7	-0.4	-0.3	-0.7	-0.5	0.5	0.2	0.1	0	-0.1	0.8	0.6	0.9	-0.2	0.9	-0.1	-0.2
I	0.8	-0.5	-0.1	-0.5	0.2	-0.3	0	-0.3	0	-0.2	0.4	0.5	0.2	-0.2	0.2	0	0.5	0.6	-0.1	-0.2
L	0.5	-0.3	-0.2	0	0.5	-0.1	-0.5	-0.3	-0.1	-0.1	-0.1	0.4	-0.9	0.2	0.3	0.3	0.8	0	-0.6	0.3
V	0.1	-0.7	-0.1	-0.3	0.3	0	-0.1	-0.3	-0.3	0.2	0.2	0.2	0.1	0.2	0.2	0.1	0.4	0.7	0.4	-0.1
M	-0.1	0	0.2	0.2	0.4	0.5	-0.3	0.5	-0.5	-0.2	0.1	-0.2	-0.1	-0.4	-0.3	-0.1	0.2	0.3	-0.4	-0.4
W	0.5	-1.1	-1	-0.6	-0.4	-0.4	-0.4	-0.1	1.6	0	-0.2	0.1	-0.1	0	-0.2	0.4	0.3	0.9	-0.7	1.2
Y	-0.3	-0.3	0.6	-0.5	-0.5	-0.2	-0.7	-0.2	1.4	0.8	-0.4	-0.2	0.5	0.3	0.5	0.4	-0.5	-0.6	0	-0.1
D	-0.4	0	0.4	-0.1	0	0	-0.3	-0.1	0.5	0.1	0.1	0.3	-0.5	0.8	0.1	-0.2	-0.5	-0.1	0.2	-0.3
E	-0.7	0.6	0	0.4	0	0.2	-0.4	-0.2	-0.4	0.1	0.5	0.4	0.3	0.2	-0.2	-0.2	-0.1	-0.2	0.4	-0.7
K	-0.4	0.7	0.3	0.6	0.1	0.3	1.5	0.6	-0.9	-0.4	-0.2	-0.9	0	0.4	-0.7	0.1	-0.1	0.4	-0.2	-1.1
R	-0.4	1	0.3	0.4	0.4	0.6	0	0.7	-0.3	-1	-0.2	-0.5	0.1	-0.5	-0.6	-0.6	-0.1	-0.5	-0.2	1
H	-0.4	0.8	0.9	0.3	-0.1	-0.2	0	0.9	0.3	-0.4	0	-0.6	0.5	0	-0.1	-0.2	0.1	-0.5	-0.9	0.2
N	0.1	0.3	0.3	-0.1	-0.2	-0.4	0.6	0.1	-0.5	-0.3	0.6	0.5	-0.3	-0.1	0.3	-0.1	0	-0.4	-0.3	0
Q	-0.1	0.4	0.4	0.8	0	0.5	0.3	0.3	-0.3	0.2	-0.2	-0.3	0.7	-0.2	0	-0.5	0.1	-1.1	-0.1	-0.8
S	-0.7	0.1	0.1	-0.1	-0.3	0	0.1	0.3	0.2	0.3	0	0.2	0	-0.2	0.4	-0.3	0	0.1	0.4	0.1
T	0.1	-0.1	0.3	0.5	0	0	0.4	-0.1	-0.1	0.2	0.4	-0.4	0.1	-0.4	0	-0.1	0.1	-0.4	0.1	-0.5
G	0.1	-0.1	0.4	0.2	1	0.5	0.3	0	-0.9	-0.1	-0.3	-0.5	-0.6	-0.4	-0.3	0	-1	-0.6	1	1.6
P	0.8	-0.7	-1.2	-0.2	-0.5	-0.4	-0.5	-0.8	0.2	-0.2	-0.2	0.7	-0.4	-0.3	0.2	0	0.5	0.4	1.2	-0.1
C	-0.4	0.4	0.1	0.5	0.1	-0.4	0	-0.2	-0.3	-0.1	0.3	0.3	-0.4	-0.5	-0.1	0.3	-0.1	-0.3	-0.5	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0291	0.7	0.2	0.6	0.8	0.9	-1.1	-0.9	-0.1	-0.3	0.2	0.2	0.4	-0.2	-0.5	0.3	0.7	0.1	0.2	-0.8	-1.2
0293	0.1	1	1	1.8	0.9	-0.4	-1	0.2	-0.6	-0.1	-0.3	-0.1	-0.5	-0.6	-0.4	0.5	0.2	-0.3	-0.2	-0.6

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0291_0293	0.820	0.78
0291_0292	0.784	0.73
0290_0291	0.550	0.35

See all coupling residues
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