OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [S:0288] and [E:0289]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	-0.3	0.2	-0.1	0.7	-0.1	-0.3	0.1	0.2	0.1	-0.1	-0.4	0.1	-0.1	-0.2	0.1	0.2	0.3	-0.1	0
F	0.8	-0.2	-0.8	0	0.2	-0.1	-0.1	-0.5	0.5	0.9	0	-0.1	0.2	0.4	0.2	0.2	0.4	-0.6	-0.5	-0.3
I	-0.7	0.4	0.1	0.4	-0.7	0	-0.1	-0.1	-0.1	0.3	-0.1	-0.3	0.5	0.7	-0.5	0	-0.3	-0.5	0.5	0.2
L	0.1	-0.4	-0.3	0.1	-0.3	0.1	-0.3	-0.5	0.6	0.3	0.2	0.2	-0.1	-0.1	0.1	0.4	0.5	0.1	0.1	-0.1
V	-0.2	0	-0.3	-0.1	0.3	-0.3	-0.1	-0.1	-0.2	0.3	0.1	0.4	-0.5	0.7	-0.1	0	-0.1	0.1	-0.2	0.2
M	0.1	-0.2	0.8	-0.3	-0.3	0.1	-0.1	-0.6	-0.1	0.1	0.7	0.4	-0.3	-0.3	0.1	0	0.4	-0.3	0	0.2
W	0.1	-0.3	-0.2	-0.3	-0.3	-0.3	-0.1	0	0.3	-0.5	-0.6	0.6	-0.5	-0.2	0.1	1.2	0.4	-0.2	0.4	0.1
Y	0.4	0.3	-0.6	-0.6	-0.6	-0.2	-0.1	-0.4	-0.3	-0.1	-0.1	0.9	0.4	-0.5	-0.1	0.1	-0.4	0.7	0	0.7
D	-0.1	0.4	0.4	0.7	0	0	0.1	0.2	-0.2	-0.4	-0.4	-0.3	0.2	-0.2	-0.7	-0.1	0.1	0.7	-0.4	0
E	-0.3	0.1	0	0.6	0	0.1	-0.1	0.3	0	0.6	-0.3	-0.3	0.1	-0.1	-0.1	-0.5	-0.7	0.5	-0.3	-0.1
K	-0.1	0	0.4	0.2	-0.1	-0.1	-0.3	0.3	-0.4	0	0.4	0.1	-0.3	0	0.6	-0.2	-0.2	0.1	-0.2	0
R	0.1	-0.3	0.4	-0.1	0.2	-0.2	0.1	-0.1	-0.1	-0.2	0.4	0.5	-0.1	-0.2	0.6	0	0.2	-0.3	-0.3	0
H	0.1	0.1	-0.2	0.3	-0.5	-0.3	-0.1	0	-0.5	-0.6	0.3	0.1	0.2	0.2	1.1	-0.5	-0.2	0.1	-0.3	0.1
N	0	-0.3	0.1	0.6	-0.1	0.1	-0.1	0.1	-0.3	0.2	0.6	-0.1	0	-0.1	0	0	-0.4	0.1	0.5	-0.4
Q	-0.2	-0.3	0.1	0.1	0.4	0.1	-0.2	-0.3	-0.3	-0.2	-0.1	0.2	-0.4	0	0.7	0.2	0.2	-0.1	-0.2	0
S	-0.3	-0.3	0.1	0.1	0.2	0	0.2	0.1	0.2	0	-0.1	-0.2	-0.1	-0.1	-0.1	0.2	0.2	-0.3	0.3	0.2
T	0.3	0.1	0.2	0.2	0.3	-0.1	-0.2	-0.1	0	-0.1	0.3	-0.4	0.1	0.1	-0.4	-0.1	-0.4	0.3	0.2	-0.2
G	0.5	0.1	0.2	-0.1	0.4	-0.2	0	0.5	0.3	0.3	0	-0.2	0.2	0.2	0.1	0	0	-0.1	-0.5	0.1
P	0.6	0.7	-0.7	-0.4	-0.2	0.5	0.2	0.7	0.6	0	-0.6	-0.2	0.5	-0.3	-0.6	-0.1	-0.1	0.3	0.5	-0.4
C	-0.5	-0.3	-0.3	-0.6	0.3	0.5	0.1	-0.2	-0.2	-0.3	0.6	0.3	-0.1	-0.4	0	0	1	-0.5	0.6	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0288	0.6	-0.8	-0.6	0.2	-0.3	-0.9	-1.5	-1.2	0.6	0.6	0.7	0.4	-0.6	0.3	0.1	0.9	0.2	1.7	0.4	-1.1
0289	0.5	-1.4	-0.5	0.2	-0.1	-1	-2.7	-1	0.1	1.4	1.4	1.1	-0.6	0	0.9	0.8	0.9	-0.1	0.4	-0.8

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0287_0289	1.402	0.99
0288_0289	0.569	0.39

See all coupling residues
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