OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [S:0275] and [C:0278]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.4	-0.5	-0.7	-0.2	-0.2	0.1	0.2	0.7	1	0.3	-0.2	-0.2	0.1	0	0.1	-0.1	-0.2	0.1	0.1
F	-0.2	0	-0.1	-0.5	0.1	-0.3	-0.1	-0.1	0	-0.3	-0.4	-0.4	0.2	0.8	-0.1	-0.6	1	0.8	-0.1	-0.3
I	-0.3	0.3	-0.1	-0.2	-0.1	-0.1	-0.1	-0.2	-0.3	-0.1	-0.2	0.2	-0.3	0.3	0.7	0.2	0.1	-0.5	0	0.3
L	-0.1	1.3	-0.2	1.2	-0.3	0.1	0	1.1	0.2	-0.1	-0.4	-0.8	-0.4	-0.5	-0.5	-0.1	-0.2	0.4	-0.1	0.3
V	-0.1	-0.1	0.1	0.1	-0.2	0	-0.1	-0.1	0.5	0.3	-0.3	-0.1	-0.1	0.1	-0.3	0.5	-0.1	0.1	-0.2	-0.3
M	-0.1	0.4	-0.1	-0.2	0.1	0.3	0.2	0	0.1	-0.3	-0.5	0.1	-0.1	-0.6	-0.3	-0.2	0.6	0.1	0.3	-0.2
W	0.3	-0.1	0	-0.1	0	-0.1	0	-0.1	-0.1	-0.1	0.3	-0.1	-0.1	0.2	0	-0.4	-0.2	-0.3	-0.1	0.2
Y	-0.3	0.9	-0.1	-0.3	0.1	-0.4	0.1	1.2	-0.6	-0.3	0	-0.8	0	0.6	-0.2	0	-0.1	-0.1	1.4	-0.6
D	-0.2	-0.3	1.2	0.1	1.1	-0.2	0.3	-0.2	-0.5	-0.5	-0.4	0	-0.2	-0.2	-0.4	0.4	0.6	1.1	-0.8	0.2
E	0.1	-0.1	1.1	0.9	0.7	0.4	0.3	-0.4	-0.4	0	-0.5	-0.4	-0.2	0	-0.7	-0.2	-0.5	-0.3	-0.2	-0.2
K	-0.2	-0.2	-0.1	-0.2	-0.1	-0.1	-0.1	-0.2	-0.2	0.8	0.1	-0.4	-0.3	-0.7	0.2	-0.1	-0.3	0.8	0.1	-0.2
R	-0.1	-0.2	-0.1	-0.3	0.5	-0.3	0	-0.1	0.8	-0.5	0.2	-0.9	0.1	-0.1	0.5	0	0.3	0.3	-0.3	-0.3
H	-0.3	-0.2	-0.2	-0.3	-0.3	-0.1	-0.1	-0.5	0.3	0.3	-0.1	0.6	0.3	0.3	0.6	-0.2	-0.6	-0.2	0.6	-0.1
N	0.2	0.4	0	-0.4	0	-0.3	0	-0.5	-0.6	-0.6	0.2	0.9	0.7	0.1	0.1	0.5	0.1	0.1	-0.2	0.2
Q	-0.2	-0.3	-0.1	-0.2	-0.1	0.1	0	0	-0.2	0.1	-0.4	0.6	-0.1	0.3	-0.1	-0.2	0.1	0.1	0.1	0
S	0.2	-0.9	-0.3	-0.6	-0.5	0.5	-0.5	0.1	0.5	0	1.2	0.4	0.4	0.5	0.3	0	0.2	-0.4	-0.3	0.6
T	0.2	-0.1	-0.2	0.5	-0.7	-0.3	-0.3	0.4	-0.3	0.3	-0.1	-0.2	0.2	-0.1	-0.1	0.2	-0.6	0.8	-0.2	0.1
G	0.5	-0.7	-0.8	-0.5	-0.1	0	-0.2	-0.9	0.5	-0.1	0.7	0.9	0.3	0.4	0.5	-0.1	-0.3	0.1	1.1	0.3
P	0	-0.1	-0.1	0.2	0	0	-0.1	0	-0.1	0	-0.2	0.5	-0.2	0.5	0	0.7	0.3	-0.8	-0.4	-0.1
C	0.2	0.6	-0.3	1.4	-0.3	0.1	-0.3	0.1	-0.3	-0.1	-0.1	-0.4	0	-0.4	0.3	-0.1	0.2	0.4	-0.7	-0.5

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0275	0.7	-0.8	-0.7	0.2	-0.2	-0.9	-1.3	0	0.9	-0.1	-1.3	-0.4	-0.7	0.6	-0.6	1.6	1.3	1.4	-0.2	0
0278	0	-0.4	-1.4	-0.4	-0.8	-1.2	-1.8	-0.2	0.7	-0.1	0.4	0.7	-0.1	1.6	0	1.2	0.3	2.4	-0.5	-0.6

Select residue pair below:

i_j	Score	Prob
0254_0275	1.236	0.98
0275_0279	1.203	0.98
0275_0278	0.924	0.88
0275_0281	0.654	0.53
0256_0275	0.573	0.39

Local Interactions:

i_j	Score	Prob
0275_0277	2.455	1.00
0273_0275	1.438	1.00

See all coupling residues
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