May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0273] and [L:0283]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0.8 0.6 0.4 0.2 0.1 0.6 0.5 -0.3 -0.2 0 -0.5 0 -0.3 -0.7 -0.4 -0.6 -0.1 0.2 -0.2
F 1.3 -0.4 -0.3 0.1 0.5 0.4 -0.4 -0.1 -0.1 -0.1 -0.1 -0.5 -0.3 -0.1 -0.2 0.4 0.1 0.3 -0.1 0.2
I 0.7 -0.2 0.7 -0.2 0.8 0.2 -0.6 0.5 -0.3 -0.3 0.4 0.1 -0.3 -0.4 0.6 -0.4 0.3 -0.5 -0.2 0.4
L -0.2 -0.1 0.4 0.3 0.8 0.1 0.1 0.5 -0.1 0.1 0 0 -0.5 -0.2 0 0.1 -0.5 0 0 0.1
V -0.2 0.7 0.7 0.8 0.7 0.3 -0.2 0.9 -0.4 0.2 -0.2 -0.4 0 -0.2 -0.5 -1 -0.3 -0.4 -0.4 1
M 0.6 -0.3 -0.2 0.1 0.8 0 -0.5 0 -0.1 -0.1 0.1 -0.3 -0.3 -0.1 0.5 -0.2 -0.3 0.2 -0.1 -0.2
W -0.1 -0.5 -0.2 -0.3 0 -0.1 -0.2 -0.6 0 0 0 0.2 0.4 0 0.5 0.2 0 0.2 0 -0.1
Y 0.6 -0.2 0 -0.1 -0.3 -0.2 -1.1 0 0.2 0 -0.1 0.1 0 0 0.2 0.5 -0.1 0.2 0.2 0.2
D -0.1 0 -0.1 0.2 0 -0.1 -0.3 -0.3 0 0 0.2 -0.1 -0.1 0.2 0 -0.1 -0.1 0 0 -0.1
E -0.1 -0.1 0.1 0 -0.1 0 -0.4 -0.4 0 0.1 0 0 -0.1 0 0 0 0.2 0 0.2 -0.1
K 0 0 -0.1 -0.1 -0.1 0.2 -0.6 0.2 0 0 0 0 0 0 0 0 0 0 0 0
R -0.2 -0.4 -0.3 0.4 0.3 -0.1 -0.3 -0.5 0 0.5 0 0.6 0.1 0 0 -0.1 -0.1 0 0 0.1
H -0.1 0.3 -0.1 -0.2 -0.2 0 -0.1 -0.1 0 0 0 -0.1 -0.1 0 0 0.1 0 0 0 -0.1
N 0.1 -0.1 0 -0.2 -0.1 -0.1 0.7 0 0 0.1 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0 -0.1
Q -0.1 -0.1 0 -0.1 -0.2 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0 0 -0.1 0.2 0 0 0.4
S -0.7 -0.1 -0.6 -0.3 -1.5 -0.3 1.5 -0.6 0 -0.4 -0.7 0.6 1 0.7 0.1 0.9 1.2 -0.1 -0.4 0
T -0.8 0.6 0.4 0.1 0.2 -0.2 1.2 0.2 0.1 -0.4 -0.6 0.8 0.8 0 -0.5 0.8 0.6 -0.3 -0.4 -1.2
G -0.2 0.8 -0.5 -0.3 -1.2 -0.4 0.9 0.4 0.2 -0.1 0.3 0.1 0 -0.2 0 -0.4 0.1 0.6 -0.1 0
P -0.1 -0.5 -0.2 -0.1 0 0 0 0.1 0 0 0 -0.1 -0.1 0.2 0.2 -0.1 -0.1 0 0.2 -0.1
C -0.6 0.5 0.3 0.3 -0.1 0.2 0.6 0.6 -0.1 -0.2 0.1 -0.2 0.1 -0.2 -0.4 0 -0.7 -0.4 0.1 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0273 1.3 0.6 1.3 1 1.3 -0.2 -0.9 -0.1 -0.8 -1 -1.1 -0.1 -0.8 -0.3 -0.6 -0.3 1.2 0.2 -0.5 0.4
0283 0.1 1.8 0.4 1.3 0.6 0.1 2.5 1.9 -1.4 -1.4 -1.1 0 0.3 -1.1 -0.7 0 -0.4 -0.7 -1.3 -0.3
Select residue pair below:
i_j Score Prob
0254_0273 2.663 1.00
0237_0273 2.332 1.00
0273_0283 2.114 1.00
0273_0281 1.111 0.96
0231_0273 0.860 0.82
0261_0273 0.800 0.75
0258_0273 0.777 0.72
Local Interactions:
i_j Score Prob
0273_0275 1.438 1.00
0272_0273 0.747 0.68
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0191 seconds.