May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [P:0265] and [W:0305]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 0.1 0 0 -0.1 -0.1 0.2 -0.1 -0.2 0 0.1 -0.3 -0.2 0.4 -0.5 0.1 0 0.3 0.2 0.1
F 0.3 -0.6 0.1 0.3 0 -0.5 -0.3 -0.1 0.1 -0.2 -0.1 0.1 -0.3 -0.2 -0.1 0.2 0.2 -0.2 -0.3 0.7
I -0.4 0.4 0.1 0.1 0.4 -0.4 0.3 0 -0.1 0.1 -0.2 -0.2 -0.3 -0.1 0.1 -0.1 0.6 -0.1 -0.3 0.2
L 0.4 -0.2 -0.3 0.1 0.1 -0.6 -0.6 0.1 0 0.1 0.1 0.4 -0.1 -0.2 -0.2 0 0.4 0.5 -0.4 -0.3
V 0.3 0 -0.9 0 0.3 0 0.4 -0.1 -0.1 0 -0.3 -0.1 -0.4 0 -0.1 0.1 -0.2 -0.3 0.1 1.1
M 0.4 -0.4 0.5 -0.1 0.4 0.1 -0.5 0.2 -0.1 -0.2 -0.1 -0.1 0 -0.1 -0.2 -0.2 0.4 -0.1 0.2 -0.2
W 0 0.5 -0.4 0.1 -0.5 -0.1 -0.1 -0.4 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.2 0.1 0.2 -0.1 -0.2
Y -0.1 -0.4 -0.1 -0.1 -0.4 -0.1 -0.2 -0.2 -0.1 -0.2 0.1 -0.1 0.2 -0.1 -0.2 0.9 0.2 0 -0.2 0.3
D -0.3 0.2 0.2 0.1 -0.1 0.2 -0.2 -0.1 -0.3 -0.2 0 0.6 0.2 -0.1 -0.2 -0.1 -0.2 0.7 0.4 -0.5
E -0.4 0.1 0 0.2 -0.1 -0.2 -0.4 0.1 -0.1 0.2 0 0.1 0.8 -0.4 0.5 0.2 0 -0.3 -0.2 0.1
K -0.4 0 0.1 0.1 0.1 1 -0.4 0.5 -0.2 0.6 -0.1 -0.4 -0.3 0.3 0.6 -0.6 -0.5 0.3 -0.6 0.5
R 0.1 0.3 0.3 0.2 -0.3 0.1 -0.1 0.1 -0.1 0.1 -0.1 -0.5 -0.4 -0.3 0.8 0 -0.2 -0.3 0.3 0.2
H -0.3 0.3 0.4 -0.1 -0.1 -0.2 0 -0.1 0.3 0.1 -0.4 0.2 1.3 -0.3 0 -0.7 -0.2 0 -0.2 -0.2
N -0.4 -0.1 0.5 -0.1 0 0.3 -0.1 0.3 -0.1 -0.3 0.1 -0.4 0.2 0.5 0.6 -0.8 0.1 0.3 -0.1 -0.5
Q 0.2 0.3 0.1 0 -0.1 -0.4 -0.2 0.1 0 0.3 0.1 -0.3 0.4 -0.2 -0.1 0.4 0 -0.1 -0.4 -0.2
S 0.2 0 0.1 0.1 -0.1 0 0 0.2 0.6 0.4 -0.7 0.3 -0.3 0.1 -0.1 0.3 -0.1 0.1 0.2 -0.3
T 0.1 -0.1 -0.2 0.3 0.1 -0.1 0 -0.5 0.2 -0.3 1 0.2 0.3 -0.1 -0.1 0 0 -0.4 0.3 -0.1
G 0 -0.1 0.1 -0.3 0.2 0.5 0.4 0.1 -0.3 0.1 -0.2 0.3 -0.4 0.2 -0.4 -0.1 0.3 0 0.3 -0.2
P -0.1 0.6 0 -0.4 0.1 -0.1 1.1 1.1 -0.1 -1 0 0 0.1 0.1 -0.3 0 -0.3 -0.1 0.3 0
C 0.3 0.2 -0.1 -0.1 0.2 0.1 0.3 -0.3 -0.1 -0.1 -0.1 0 -0.2 -0.1 0.1 0.4 -0.5 -0.1 0 -0.3

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0265 0.5 -0.8 -0.8 -0.3 -0.3 -1.4 -1.6 -0.5 0.4 0.4 0.5 0.5 -0.1 0.5 0 1.2 0.3 0.7 2 -1.2
0305 0.7 0.8 0.7 1.1 1 -0.1 0.3 0.5 -0.9 -0.4 -0.4 -0.6 -0.3 -0.8 -0.6 0.8 0.2 -0.2 -0.3 0.1
Select residue pair below:
i_j Score Prob
0265_0305 0.941 0.89
0265_0309 0.902 0.86
Local Interactions:
i_j Score Prob
0264_0265 1.493 1.00
0265_0266 0.714 0.63
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0223 seconds.