May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0264] and [F:0270]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0.1 -0.2 0.2 0.1 0.1 0.8 -0.4 -0.2 -0.4 -0.5 -0.2 0.1 0.3 -0.3 0.5 0.1 -0.4 0 0.1
F -0.4 0 0 -0.1 -0.2 0.3 -0.8 0.1 1 -0.6 0.1 -0.6 0.5 0 -0.1 -0.1 0.6 0.2 -0.2 0.3
I -0.3 -0.4 0.1 0.2 0.3 0.1 -0.2 0.3 -0.7 -0.2 0.3 -0.2 -0.1 -0.2 0.9 0 0 0.4 0.3 -0.1
L 0.4 -0.3 0.3 -0.1 0.1 0 -0.8 -0.4 1.1 0.8 0.1 -0.4 -0.5 0.3 0.6 -0.4 0.4 0.4 -0.5 -0.2
V -0.3 0 -0.2 0.7 0.3 0.5 0.1 0.5 -0.2 -0.5 0.3 -0.3 -0.2 0.3 0.6 -0.2 -0.5 -0.2 0.2 -0.3
M 0 -0.7 0 -0.1 -0.1 -0.3 -0.7 -0.1 -0.4 -0.1 0.1 -0.2 1.2 0.1 0.1 -0.1 -0.1 0.6 -0.1 0.4
W -0.2 -0.2 0.6 -0.4 -0.4 -0.2 -0.2 0.1 0 -0.1 0 0.3 -0.1 -0.1 -0.3 0.6 -0.3 -0.1 0 -0.1
Y -0.2 0.1 0.2 0.1 -0.1 -0.1 -0.5 0.5 -0.3 -0.5 0.9 0.4 -0.3 -0.1 -0.6 0.1 0.5 -0.1 -0.1 -0.1
D -0.3 0.5 -0.2 -0.1 -0.8 -0.5 0.8 0.5 0.4 -0.3 0.4 1.1 -0.1 0.3 -0.3 0.4 0 -0.6 -0.1 -0.1
E 0 -0.2 -0.2 -0.6 0.1 -0.4 0.9 0.2 -0.2 -0.7 0.1 0.8 0.9 0.8 -0.7 0.1 -0.1 -0.5 -0.1 -0.5
K -0.4 -0.2 0.4 -0.1 0.6 -0.2 -0.3 -0.3 -0.2 1.2 -0.2 -0.3 -0.7 -0.1 0.4 -0.3 0.2 -0.3 -0.1 0.1
R -0.2 -0.8 0.5 -0.5 0 0.1 -0.7 -0.6 -0.1 2 -0.7 -0.6 0.3 -0.5 1.6 -0.1 -0.2 0.5 0.1 -0.4
H 0.4 0.1 0 0.5 -0.2 0.5 -0.8 -0.2 0.2 -0.2 -0.3 -0.4 -0.3 -0.1 -0.1 0 0.7 -0.5 -0.3 0.1
N 0.1 0 0.5 0.4 0.4 0.6 -0.2 -0.4 -0.5 0.7 -0.2 -0.2 0.2 -0.8 0.3 0.4 -0.1 -1 -0.1 0.8
Q 0.4 -0.1 -0.3 0.2 -0.1 -0.6 0 -0.1 -0.2 -0.4 1.6 0.3 0.6 0.8 -1.1 -0.5 -0.7 -0.3 -0.1 -0.2
S 0.3 0.2 -0.1 0.1 0.3 0.5 0.8 0.5 0 0.3 -0.4 0.1 -0.1 -0.1 -0.2 0.2 -0.1 -1.2 -0.4 0.1
T 0.5 0.4 -0.4 -0.1 0.1 0 1 0.4 -0.1 -0.1 -0.4 0 0.1 -0.1 -0.3 -0.5 -0.5 0.5 -0.4 0.5
G -0.1 1.5 -0.4 0.4 0.1 -0.3 0.2 0.3 -0.4 -0.6 -0.7 0.1 -0.3 -0.3 0 0.4 0.2 -0.5 0.9 -0.1
P 0.2 0 0 -0.3 0 -0.2 -0.2 -0.6 -0.2 -0.3 0 0.3 -0.4 -0.2 0.1 0.2 0.1 1.2 0.3 -0.4
C 0.2 -0.1 0.2 0.8 0.3 0.9 0.4 -0.4 -0.4 -0.5 -0.4 0 0.1 -0.5 -0.6 -0.3 -0.4 1 -0.3 0.5

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0264 0.6 -0.4 0.1 0.9 0.5 -0.6 -1.4 -0.4 0.7 -0.3 -1 -0.6 0.4 0.7 -0.9 1.6 0.3 0.2 -0.3 0
0270 0.1 0.6 1 1.5 1.1 0.2 -0.3 0.9 -1.2 -0.6 -0.6 0 0.2 -0.6 -0.3 0.3 0.3 -0.6 -1.1 -0.1
Select residue pair below:
i_j Score Prob
0264_0305 1.483 1.00
0264_0269 0.883 0.84
0264_0270 0.867 0.83
0264_0267 0.800 0.75
0264_0272 0.533 0.33
Local Interactions:
i_j Score Prob
0264_0266 2.265 1.00
0264_0265 1.493 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0177 seconds.