OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0262] and [T:0304]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0	0	0.1	0.3	0.1	-0.3	0	-0.1	0	0.1	-0.2	-0.2	-0.6	0.1	-0.1	0.3	0.1	0.1	0
F	0.1	-0.1	-0.2	0.2	0	-0.1	-0.1	0	0.4	-0.3	-0.2	-0.3	-0.1	0.1	-0.4	0.7	0.1	-0.3	0.2	0.3
I	0.5	-0.4	0.2	0.3	0.6	-0.4	-0.2	-0.4	0.3	0.1	-0.8	-0.6	0.7	0.1	-0.5	0.5	0.3	-0.2	-0.1	0.2
L	0.8	0.1	0.1	0.1	0.5	0.3	0.2	0.4	0	-0.3	-0.7	-0.9	-0.2	-0.3	-0.3	0.2	0.6	0	-0.1	-0.1
V	0.5	0.1	0.6	0.3	0.6	-0.2	-0.3	-0.5	0.3	0	-0.4	0.1	-0.3	-0.6	-0.4	0.1	0.3	0.3	-0.2	0.1
M	0.1	-0.1	-0.3	1.2	0.2	-0.2	-0.1	0.5	-0.2	-0.1	-0.5	-0.1	-0.4	-0.3	-0.3	0.2	0.1	-0.1	0	0.1
W	-0.5	0	-0.1	0.1	0.1	0	0	0	0.6	-0.1	-0.2	-0.2	-0.1	-0.1	-0.2	0.4	0.1	0.1	0	-0.3
Y	0.1	0.3	0.2	-0.6	-0.5	0.3	0.2	0.5	-0.7	0.3	-0.1	0.4	-0.1	0.5	-0.2	0.4	-0.1	0.2	-0.1	-0.8
D	-0.3	-0.3	-0.1	0.2	-0.5	-0.1	0	-0.5	-1.3	-0.6	1.8	1.2	0	0.3	0.4	0.1	-0.2	0.1	0	-0.3
E	-0.4	-0.2	0.2	-0.2	-0.3	0.2	-0.1	-0.5	-1.2	-0.7	1.6	0.9	0	0.4	0.3	0.3	-0.1	-0.1	0	-0.3
K	0	0.1	-0.3	-0.4	0	-0.2	0.2	0.7	1.5	0.9	-1	-0.8	-0.4	0.4	0	-0.2	-0.1	-0.1	-0.2	0.1
R	0.2	-0.5	-0.1	0.3	-0.1	-0.2	-0.1	0.6	1	0.8	-1.1	0.2	0.6	-0.2	-0.3	0	0.1	-0.3	-0.2	-0.4
H	-0.1	-0.1	-0.4	-0.5	-0.1	-0.1	-0.1	0	0.2	-0.6	0.4	0.6	-0.3	0.1	0.4	0.3	-0.2	0.1	-0.1	0.4
N	-0.2	-0.2	0.5	-0.5	-0.4	0	-0.1	-0.1	-0.3	1.1	0.6	-0.3	0.2	1.3	0.5	-0.7	-0.9	-0.2	-0.1	0.1
Q	-0.1	-0.2	0.1	0.5	-0.3	-0.5	-0.3	-0.4	0.2	-0.5	0	0.3	0.2	0.3	0.9	0.1	-0.1	-0.1	0.2	0.1
S	-0.1	0.8	0.1	-0.2	-0.1	0	-0.2	-0.4	-0.2	0.3	0.3	0	0.4	0.1	0.4	0	0.1	0	-0.4	-0.1
T	0.2	0.7	0.3	-0.3	0.3	-0.2	-0.2	-0.2	0.1	0.2	0.2	-0.2	-0.2	-0.8	-0.1	0.3	0.3	-0.2	0.4	0.3
G	-0.2	-0.2	-0.3	0.1	0.1	0.6	-0.2	0.2	-0.5	0	-0.2	-0.5	0.2	-0.4	0.3	-0.6	0	0.1	0.1	0.7
P	-0.3	0	0.1	-0.1	0.4	0	0	0	0.1	0.1	-0.2	-0.2	-0.1	0.2	0.1	-0.5	-0.1	0.1	0	-0.3
C	-0.1	0.1	-0.2	-0.3	0	0.6	0.8	-0.1	-0.1	-0.5	-0.2	0.4	0.4	-0.5	-0.1	-0.2	-0.1	0.2	-0.2	0.7

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0262	0.7	-0.3	0	0.2	0.8	-0.7	-1.3	-0.5	0.3	0.2	0.1	0.2	0	-0.1	0.1	0.8	0.9	0	-1.1	0.6
0304	1.4	-0.7	0.4	0	1	-0.6	-1.5	-0.5	0.4	0.1	-0.3	0.7	-0.2	-0.2	0	1	0.7	0	-1.2	0.4

Select residue pair below:

i_j	Score	Prob
0262_0304	1.599	1.00
0035_0304	1.043	0.94
0034_0304	0.728	0.65
0304_0313	0.578	0.40

Local Interactions:

i_j	Score	Prob
0302_0304	1.009	0.93
0303_0304	0.799	0.75
0304_0305	0.624	0.48

See all coupling residues
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