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Coupling matrix for [G:0260] and [L:0274]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.8 -0.1 -0.1 0 0.1 -0.1 -0.1 -0.1 -0.1 0.4 0.2 -0.5 0.7 -1.1 -0.1 0.2 0.1 0.8 -0.6 -0.2
F 0 0 0.6 0.1 -0.2 0.1 -0.1 0 -0.2 0.5 0.3 -0.5 -0.3 -0.3 0.1 -0.6 -0.7 0.8 0.3 -0.1
I -0.2 0.1 0 -0.2 0 0.1 -0.1 0.1 0.3 -0.1 0.1 0.4 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.3 -0.5
L 0.2 0 -0.1 -0.4 0.5 -0.2 -0.1 -0.1 -0.1 0.1 0.7 1.1 -0.3 -0.3 -0.1 -0.6 0.2 -0.6 -0.3 0.1
V 0.6 0.7 0.3 -0.5 -0.1 -0.3 -0.1 -0.3 0 -0.2 0.4 0.3 -0.3 -0.5 -0.2 0.1 -0.4 0.9 0.1 -0.2
M 0.3 -0.1 0.5 -0.1 0.4 -0.1 -0.1 -0.1 0.1 -0.1 0.2 0.4 -0.1 -0.2 0.1 0 -0.4 -0.7 -0.1 -0.2
W -0.2 -0.1 -0.2 0.2 0.1 0.2 0 -0.1 -0.1 0 0 0.3 0.2 0.1 0.2 -0.2 0.2 -0.4 -0.1 -0.4
Y -0.2 -0.1 -0.3 0 0.1 -0.1 0.2 0.3 -0.1 0.2 0.1 0.4 -0.1 -0.5 -0.1 -0.1 -0.1 0.1 -0.3 0.2
D 0.4 -0.6 0.9 0.6 1.1 -0.3 -0.3 -0.6 -0.1 -0.4 -0.3 -0.8 -0.3 0.3 -0.4 0.6 0.9 -0.7 -0.7 0.6
E 0 0.4 -0.2 0 0 -0.2 -0.1 0.6 0 -0.1 -0.2 0.1 -0.1 0 -0.1 0.1 -0.5 -0.2 -0.1 0.2
K 0.2 0.1 0.1 -0.1 0.2 0.2 -0.3 0.4 -0.2 -0.3 -0.3 -0.6 -0.5 -0.7 0.3 0.5 0.3 -0.1 0.3 0.6
R -0.4 -0.3 0 0.4 -0.2 0.2 0 -0.4 -0.2 -0.2 0 -0.8 -0.4 -0.4 0.7 -0.1 0.2 0.1 1.8 0.3
H 0.2 -0.1 -0.5 0.1 -0.1 -0.3 -0.2 0.6 -0.1 0 -0.3 0.1 -0.4 1.8 0.1 -0.2 0.1 -0.7 -0.1 -0.3
N -0.3 0.1 -0.7 -0.4 -0.3 -0.1 -0.2 -0.1 -0.3 0.1 0 -0.4 0.3 1.3 -0.3 0.6 0.9 -0.4 0.2 0.5
Q -0.4 -0.4 0.5 0.3 0.1 0.8 -0.2 -0.3 -0.3 -0.2 -0.3 0.7 -0.7 1.1 -0.1 -0.2 -0.2 -0.4 1.1 -0.1
S 0.2 0.3 0 -0.5 0 -0.6 -0.7 -0.2 0.3 0.2 0 -0.5 0.5 -0.2 -0.1 0.6 0.8 0.9 -0.7 0.1
T 0.6 0.1 -0.3 -0.2 -0.4 0.5 0 -0.1 0.2 0 0 -0.5 -0.6 -0.1 -0.3 0.3 0.1 1 -0.4 -0.5
G -0.7 0.6 0.5 0.9 0.4 -0.2 1 0.8 -0.3 -0.3 -0.8 0 1.1 -0.2 0 -0.2 0 -1 -0.9 0.7
P 0 -0.2 -0.6 -0.3 -0.2 -0.1 0.9 -0.2 0.3 -0.1 0.1 0.9 -0.1 -0.1 0.3 -0.5 -0.7 -0.1 1.2 -0.1
C 0.5 -0.4 -0.1 -0.1 -0.7 0.4 -0.1 -0.6 0.3 0 -0.4 -0.4 0.1 0.2 -0.3 0.4 -0.2 1.5 -0.8 0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0260 0.2 -0.2 -0.2 -0.1 0.1 -0.3 -0.8 -0.4 -0.1 0.2 -0.1 0.8 -0.1 0.1 0.5 0.8 0 0.9 -0.2 -0.1
0274 1.9 -0.5 0.6 0.5 1.2 -0.6 -1.1 -0.4 -0.6 -0.6 -1.3 -0.3 -1.5 -0.4 -0.8 1.2 0.9 0.8 -0.6 1.1
Select residue pair below:
i_j Score Prob
0260_0274 2.502 1.00
0217_0260 0.898 0.86
0260_0302 0.885 0.85
0260_0303 0.836 0.80
Local Interactions:
i_j Score Prob
0260_0262 0.816 0.77
0259_0260 0.665 0.55
0260_0261 0.591 0.42
0258_0260 0.587 0.41
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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