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Coupling matrix for [T:0259] and [R:0301]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.5 -0.3 -0.1 0.4 -0.1 0.1 -0.9 0.1 0.2 0.4 0.3 0.1 -0.2 -0.4 0.3 0.1 0.6 -0.1 0
F 0.1 0.9 -0.5 -0.3 -0.2 0.2 0.2 0.9 -0.2 -0.8 -0.1 -0.4 -0.4 -0.3 0.2 -0.1 -0.6 0 0.7 0.6
I -0.8 0.2 0.4 0.1 -0.2 -0.3 0.1 0 -0.2 -0.2 -0.6 0.7 -0.5 0.9 0.2 0.1 0.2 0.1 -0.3 -0.2
L -0.7 0.5 0.2 -0.3 -0.5 -0.4 1 -0.2 -0.3 -0.2 1 0.6 -0.8 0 0.3 0.1 -0.1 -0.1 0.8 -0.7
V -0.5 0 -0.1 0.5 0.4 -0.2 0.1 -0.1 0 -0.3 -0.1 -0.4 -0.5 0.1 0 0.1 0.5 0.5 -0.1 -0.1
M -0.1 0.7 -0.2 -0.3 -0.4 0.3 1.2 0.1 -0.2 -0.5 -0.1 0 -0.3 0 -0.7 0.1 -0.1 0 0.3 -0.2
W -0.2 0.3 -0.1 0.5 -0.1 -0.3 0.4 0.1 -0.5 -1 0.5 0.5 -0.1 -0.3 -0.1 -0.3 -0.2 -0.3 0.5 -0.1
Y -0.1 1 0 0.3 -0.4 -0.2 1.1 1.4 -0.2 -0.5 -0.4 0 -0.1 0.4 -0.6 -0.6 -0.9 -0.1 -0.7 -0.1
D -0.1 -0.3 -0.3 -0.4 -0.7 -0.3 -0.6 -0.5 0.8 2 0 -0.3 0.7 -0.5 -0.1 0.1 0.6 0 -0.3 0.2
E 0.2 -1.5 0.9 -0.1 1.3 0.1 -0.5 -0.5 -0.3 0.3 -0.4 0.6 0.5 -0.3 -0.5 0.5 0.8 -0.3 -0.3 -0.4
K -0.3 -0.7 -0.1 -0.3 0.2 -0.2 -1.1 0.3 -0.1 0.7 -0.2 0.1 0 0.8 0.5 -0.2 0.2 -0.5 0.5 0.4
R 0 0.4 0.2 0.4 0.6 0.2 -0.6 0.4 0 0.4 -0.4 -0.3 -0.2 0.2 0.6 0 -0.1 0.2 -0.4 -0.7
H 0.3 0.8 0 -0.2 -0.6 0.5 -0.8 0.6 -0.1 -0.8 -1 0.5 0.7 0 0.1 -0.1 0 0.3 -0.4 0.1
N 0.8 0.2 -0.4 -0.3 0.3 0.1 -0.5 0.7 0 -0.4 0.4 -0.5 -0.1 0.6 -0.3 0.3 -0.1 -0.3 -0.5 0.4
Q 0.1 0.3 -0.3 -0.3 -0.2 0 0 -0.5 0.8 -0.4 0 -0.7 0.3 0 0.4 0.2 -0.2 -0.2 0.1 0
S 0 0.1 0.2 0.3 0.1 0.3 -0.1 0 -0.1 0.1 0.2 -0.6 -0.1 -0.3 -0.2 0.4 0.4 0.1 -0.2 0.1
T 0.3 -0.4 0.1 0.5 0.5 0.2 0.2 -0.3 -0.1 -0.2 0.3 -0.2 0.3 0.2 0.4 0.3 0.4 -0.1 -0.8 -0.1
G 0.3 -0.8 0 -0.3 0.2 -0.1 -1.1 -0.3 0.2 0.4 0.4 0.2 -0.8 -0.4 0.3 0.2 0.3 0.6 1.4 -0.2
P 0.3 -0.4 -0.5 -0.1 0.1 -0.1 0.1 -0.3 0 -0.3 -0.2 1 0.1 -0.4 0.1 -0.2 -0.2 0.2 -0.2 -0.1
C -0.3 -0.5 1.1 1 -0.6 0.5 0.8 -0.5 -0.3 0.1 -0.3 -0.6 -0.2 0 0.2 -0.4 -0.4 -0.6 0 0.6
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0259 -0.1 -0.1 -0.4 0.6 0.2 -0.7 0.1 0 -0.5 -0.3 -0.3 0.6 -0.3 0.8 0.2 1.3 1.4 0 -1.3 -0.4
0301 0.1 0 0 0.7 0.4 -0.3 -0.4 0.1 -0.7 -0.4 -0.3 0.8 -0.3 0.5 -0.1 1 1.4 0 -0.7 -0.7
Select residue pair below:
i_j Score Prob
0259_0276 1.585 1.00
0216_0259 0.806 0.76
0259_0301 0.697 0.60
Local Interactions:
i_j Score Prob
0257_0259 0.716 0.63
0259_0260 0.665 0.55
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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