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Coupling matrix for [H:0254] and [A:0281]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.3 0.5 0 -0.5 0 0.6 0.6 -0.2 -0.2 0.1 0.1 -0.2 -0.1 -0.1 0.1 0 -0.1 0.6
F 0.3 0.3 0.2 -0.8 0.5 -0.6 -0.2 0.2 -0.3 0.7 0.7 0.4 0.1 -0.5 0.1 -0.2 -0.3 -0.1 -0.2 -0.6
I -0.2 -0.5 0.2 -0.1 -0.3 0.1 0.2 -0.4 -0.3 -0.4 -0.1 -0.3 0.1 0.7 0.9 -0.2 -0.2 0.3 -0.1 0.1
L -0.1 -0.3 0.2 0.3 0 -0.2 0.3 -0.1 -0.1 -0.1 0.3 0.5 0 0.6 -0.3 -0.1 0.1 -0.2 -0.3 0
V 0.1 -0.5 -0.1 -0.6 -0.2 -0.2 0.2 0 -0.6 -0.1 -0.2 0.1 0.4 0.6 0.4 0.8 0.6 -0.2 -0.1 0.1
M 0.4 -0.1 -0.1 0.1 -0.2 0 -0.1 0.4 -0.1 -0.6 -0.3 0.1 -0.3 -0.2 0.4 -0.1 0.1 0.2 0 0.3
W 0 0.3 -0.2 -0.3 -0.2 0 -0.1 0 -0.2 -0.2 0.5 0 -0.2 0.2 -0.2 0.1 -0.1 -0.1 0 -0.2
Y -0.1 -0.3 0.3 -0.4 0.6 -0.2 -0.5 -0.5 0.2 -0.3 0.5 0 0 -0.2 0.1 0 0.3 0 0.5 -0.3
D -0.5 -0.2 -0.5 -0.4 0.2 0.8 -0.3 -0.2 -0.8 -0.6 0.8 0.3 0.5 0.5 0.1 -0.2 0.1 0.2 -0.1 0.1
E -0.1 0.3 -0.3 0 -0.3 0.4 0 0 -0.2 0 0.4 -0.1 0 0 -0.2 0.1 -0.1 0.1 0.1 0
K 0.2 0.1 0.1 0.3 -0.4 -0.4 -0.4 -0.8 0.1 0.1 -0.2 -0.1 0 0.1 0 0.3 0.5 0.1 -0.1 0.8
R 0.1 -0.8 -0.2 -0.1 -0.4 -0.2 -0.4 -0.7 2 0.8 -0.1 0.3 -0.6 0.1 0.2 0.3 0.3 0.1 -0.1 -0.2
H 0.1 0.7 0.4 0.2 0.2 0.3 -0.5 -0.5 0.7 -0.5 0.3 -0.5 -0.1 0 -0.3 0.2 -0.5 -0.2 -0.9 0.3
N -0.2 0.1 -0.3 0.1 0 0 -0.2 0.3 0.7 0.5 0.2 0 -0.4 0 0 -0.1 -0.6 0.3 0.1 -0.1
Q 0.8 0 -0.3 -0.1 0.3 -0.8 0 0.6 -0.3 0.6 -0.6 -0.5 0 -0.4 -0.1 -0.3 0.3 0.5 -0.1 0.2
S -0.7 0.5 -0.1 0.2 0.1 0.4 0.3 0.5 0 0.5 -0.3 0.2 0.2 -0.3 0 -0.4 -0.3 -0.2 0.2 -0.5
T 0.1 0.3 0.6 0.2 0.2 -0.1 0.1 0.1 -0.9 0.6 -0.4 0.1 0.5 -0.3 -0.3 0.2 -0.1 -0.3 -0.2 0.3
G 0.6 -0.5 -0.2 0.4 0 -0.1 0 0.3 -0.2 -0.1 0 0.3 0.1 -0.2 0.1 0 0.3 -0.3 -0.2 -0.2
P -0.3 0.6 0.2 0.5 0.2 -0.5 1.3 0.6 -0.2 -0.6 -0.4 -0.4 0.5 -0.5 0.2 -0.1 -0.2 -0.3 0.2 -0.3
C -0.2 0.3 0.2 0.5 -0.4 0.9 -0.4 0.1 0.1 0.4 -0.5 0.2 -0.3 0.1 -0.6 0 -0.6 -0.1 -0.1 -0.7
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0254 0.4 -0.2 -0.2 0.6 -0.3 -0.7 -1.6 -0.4 0.2 0.3 0.3 0.1 -0.3 0.5 -0.3 0.8 0.6 0.5 0.5 -0.9
0281 0.3 0.2 0.2 0.7 0.7 -0.7 -0.8 0.4 -0.6 0 0.2 0.8 0.3 -0.3 0.4 0.3 0.5 -0.3 -1.5 0.1
Select residue pair below:
i_j Score Prob
0254_0273 2.663 1.00
0254_0275 1.236 0.98
0254_0258 0.954 0.90
0254_0277 0.776 0.72
0254_0281 0.598 0.43
Local Interactions:
i_j Score Prob
0253_0254 1.495 1.00
0254_0255 0.661 0.54
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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