OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0253] and [L:0283]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0.6	-0.5	0	-0.7	0.1	0.7	0.3	0	0.4	-0.2	-0.3	0.3	-0.1	-0.2	0	-0.2	0.6	-0.1	-0.1
F	0.8	0.1	0.7	1.5	0.5	0.4	-0.7	-0.6	-0.1	-0.1	-0.1	-0.3	-0.4	-0.1	-0.2	-0.3	-0.6	-0.2	-0.1	-0.3
I	-0.3	-0.3	0.2	0.4	0.1	0	-0.3	-0.2	0	0.1	-0.1	-0.4	-0.3	0.3	-0.3	0.3	0.6	-0.1	-0.1	0.4
L	-0.3	0.2	0.6	0.5	0.9	-0.1	-0.6	-0.1	-0.2	-0.2	0.2	-0.5	0.5	-0.3	-0.5	0.2	0.3	-0.4	0.1	0.3
V	-0.7	0.4	0.1	0.5	0	0.3	-0.2	0.2	-0.2	0.1	-0.1	-0.4	-0.1	-0.3	0.6	0.1	0.9	-0.4	-0.2	0.3
M	0.1	-0.1	0.5	0.8	0	0.1	-0.3	-0.6	0	0	-0.1	0.2	-0.5	-0.1	0.2	-0.3	-0.3	0.2	0	-0.1
W	-0.3	-0.9	0.6	-0.2	1.3	0	-0.1	-0.7	0	0	0	-0.1	0.1	-0.1	-0.1	-0.1	-0.4	-0.1	0.5	-0.4
Y	0.9	0.5	-0.5	-0.5	-0.4	-0.4	0.1	0.2	-0.1	-0.1	-0.1	-0.4	-0.1	0.4	-0.1	-0.4	-0.1	0.3	-0.1	-0.2
D	-0.7	0.2	-0.2	0.1	-1	0	0.6	1	-0.1	-0.1	0.1	1.2	0.1	0.3	-0.3	-0.3	-0.5	0	-0.1	-0.4
E	0.3	0	-0.6	-0.2	-0.5	-0.1	-0.2	0	-0.2	0.1	-0.2	0.2	0.9	-0.1	0.5	0.7	-0.8	0	-0.1	0.2
K	-0.6	0	-0.2	0.4	0.1	-0.5	0.1	0.6	-0.1	0.1	-0.2	0.2	0.1	0.2	0.5	0.2	-0.1	-0.1	-0.1	0
R	1.9	-0.3	-0.3	0.1	-0.2	-0.2	0	-0.1	-0.1	0.1	0.1	-0.4	-0.1	0.1	-0.1	-0.4	0.4	-0.1	0.1	0.1
H	-0.2	-0.5	-0.4	-0.6	-0.3	-0.5	0.3	0	-0.1	-0.1	-0.1	-0.1	-0.6	0.3	0.1	1.2	0.6	-0.2	-0.1	0.5
N	0.2	0.1	0.8	0.2	0.5	0.1	0.1	-0.1	0.1	0.1	0.1	0.3	-0.5	-0.2	-0.1	-0.5	-0.3	-0.2	-0.1	-0.5
Q	0.3	0.3	0.4	0	0.6	-0.4	0.2	0.1	-0.1	-0.1	-0.1	-0.5	-0.4	0.1	-0.2	0.3	-0.6	0.1	0.2	-0.2
S	-0.2	0.2	-0.2	-0.2	-0.4	0.5	0.1	0.1	0	-0.1	-0.3	0.6	0.3	-0.2	-0.6	0.3	-0.1	0.1	0	0.2
T	0	0.2	-0.3	0	-0.3	0.5	0.2	0.1	-0.1	-0.2	1	0.1	0.6	-0.3	0.5	-0.4	-0.3	-0.3	-0.1	-0.2
G	-0.3	0.2	-1.1	-0.5	-0.2	0	1.4	0.8	0.4	-0.3	-0.2	0.6	0.4	-0.2	0.3	-0.4	-0.6	0.3	-0.1	-0.3
P	0	0	-0.1	-1.1	-0.4	0.6	-0.5	0	0.3	-0.2	-0.1	0.1	0	-0.1	-0.2	0.2	1.2	0.1	-0.2	0.5
C	-0.4	-0.1	-0.3	-0.5	0.3	-0.4	0.9	0	-0.1	0	-0.1	-0.2	0	0.1	0.1	-0.1	0.2	-0.1	-0.1	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0253	0.4	-0.3	0	0.6	0.6	-0.7	-1.9	-0.6	0.1	0.4	0.2	0.2	-0.1	0	-0.4	0.9	0.5	0.6	0.4	-1.3
0283	0.1	1.8	0.4	1.3	0.6	0.1	2.5	1.9	-1.4	-1.4	-1.1	0	0.3	-1.1	-0.7	0	-0.4	-0.7	-1.3	-0.3

Select residue pair below:

i_j	Score	Prob
0273_0283	2.114	1.00
0253_0283	1.052	0.95
0283_0290	0.548	0.35

Local Interactions:

i_j	Score	Prob
0281_0283	0.674	0.56
0283_0284	0.623	0.48

See all coupling residues
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