May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0253] and [H:0254]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 -0.1 -0.2 -0.6 -0.1 -0.4 0.1 0.5 0.2 -0.3 -0.3 0.9 0 -0.1 0 -0.4 0.6 0.5 -0.2
F -0.2 -0.3 0.3 0.1 0.3 0.1 -0.1 -0.4 -0.1 0.5 -0.1 0.7 -0.4 -0.4 0 -0.1 0.4 -0.3 -0.1 -0.2
I 0.3 -0.6 -0.1 -0.7 -0.2 -0.5 0 0 -0.1 -0.1 0.5 -0.1 -0.3 0.5 -0.2 0.3 0.4 -0.3 0.5 0.1
L 0.2 -0.9 -0.4 -0.8 0.2 -0.4 -0.3 -1.1 0.5 0.3 0.6 0.3 -0.2 0 0.6 0.3 -0.1 0.2 0.8 -0.5
V 0 -0.3 -0.4 -0.1 -0.1 -0.1 -0.1 -0.8 0.6 0.3 0 0.4 -0.4 -0.5 0.3 0.4 0.1 0.1 0.3 0.5
M -0.8 -0.4 0.5 -0.5 0.3 0.3 -0.1 0.5 0.4 -0.4 0.1 0.5 -0.3 0 -0.4 -0.3 -0.4 0.3 0.4 -0.1
W 0.9 -0.1 -0.3 -0.5 -0.4 -0.2 0 0.4 -0.1 0.3 -0.2 -0.3 0.7 0 -0.4 0.7 -0.6 -0.6 0.4 -0.2
Y -0.2 0.6 0.3 -0.1 -0.4 -0.1 0.1 0.1 -0.1 0.1 0 0.7 0.1 0.2 0.1 -0.1 -0.3 -0.5 0.3 -0.1
D 0.1 0.1 0.2 -0.2 0.3 0.2 -0.3 0.1 0.1 -0.3 -0.5 0.3 -0.5 0.6 -0.3 -0.3 0 0.6 -0.4 0.2
E 0.3 -0.2 0.1 0.1 -0.1 0.1 0.3 0.1 0.1 0 0.3 -0.9 0.3 0.2 -0.1 0.2 -0.1 -0.1 -0.2 0.3
K -0.4 0.6 0 0.3 -0.3 0.2 -0.2 -0.2 -0.2 -0.3 0.8 0.9 0 -0.1 -0.4 -0.1 0.2 -0.2 -0.8 0.8
R -0.7 0 -0.1 0.2 0.2 0 0 -0.1 -0.6 0.1 0.1 -0.5 0.2 0.9 -0.4 0.2 0.5 0.3 0.1 -0.4
H 0.3 0.2 -0.2 0.3 -0.1 -0.1 -0.2 -0.2 0.5 0.7 0.1 -0.2 -0.7 -0.9 -0.1 0 0 0.2 -0.6 -0.2
N -0.6 0.1 0.7 1.3 0.4 0.1 -0.3 0 -0.3 -0.4 -0.1 -0.3 -0.3 0.5 -0.1 0.1 0.1 -0.2 -0.1 -0.3
Q -0.6 0.3 0.2 1.3 0 -0.3 0.1 0.3 -0.7 0.2 -0.4 -0.2 0.3 -0.4 0.5 -0.7 0.3 0 -0.1 -0.6
S 0 -0.4 0.4 0.1 0.3 0.1 0.2 0.3 0.1 0 0 -0.3 -0.1 0.2 -0.1 -0.1 -0.3 0.2 0.1 0
T 0.4 0.1 -0.9 0.3 -0.1 0.1 -0.2 -0.7 0.4 0.3 0.5 0 -0.8 0.2 0.1 0.1 -0.4 0.7 0.3 -0.8
G 0.3 1 0.3 -0.1 -0.2 -0.5 -0.2 1.4 -0.5 -0.5 -0.1 0 1.2 -0.1 0.4 -0.5 -0.7 -0.3 0.1 0.2
P 0.2 -0.2 -0.5 0.1 -0.5 0.4 0.4 0.3 -0.1 0 -0.2 0 0.3 -0.3 0.4 0.5 0.3 0.2 -0.1 0.1
C 0 0 -0.3 -0.3 -0.4 0 -0.1 -0.5 0.4 0 0.6 -0.5 0.4 0.1 -0.3 0.2 -0.4 0.4 0.3 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0253 0.4 -0.3 0 0.6 0.6 -0.7 -1.9 -0.6 0.1 0.4 0.2 0.2 -0.1 0 -0.4 0.9 0.5 0.6 0.4 -1.3
0254 0.4 -0.2 -0.2 0.6 -0.3 -0.7 -1.6 -0.4 0.2 0.3 0.3 0.1 -0.3 0.5 -0.3 0.8 0.6 0.5 0.5 -0.9
Select residue pair below:
i_j Score Prob
0253_0283 1.052 0.95
0253_0281 0.627 0.48
Local Interactions:
i_j Score Prob
0253_0254 1.495 1.00
0252_0253 0.852 0.81
0251_0253 0.799 0.75
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0178 seconds.