May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0249] and [S:0251]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0.2 -0.1 0.4 -0.1 0.7 0.3 0.2 0.2 -0.4 0.2 -0.1 0.5 -0.8 -0.3 -0.2 -0.3 0.1 -0.3 0.1
F 0.2 -0.2 -0.6 0 -0.3 -0.4 -1 -0.3 -0.2 0.2 0.5 0.2 0.2 0 1.1 0.6 -0.4 0.4 -0.5 0.3
I -0.4 -0.4 -0.3 0.1 -0.3 -0.5 -0.7 0.3 -0.1 0.2 0.8 0.2 0.2 0.6 -0.6 -0.2 0.9 0.2 0.3 -0.6
L -0.1 -0.3 -0.2 0 0.1 -0.4 -0.4 -0.5 0 -0.1 0.8 0 -0.1 0.7 0.2 0.4 0.2 1.1 -0.1 -0.6
V -0.7 -0.3 -0.4 -0.2 0.2 -0.7 -0.7 0 0.1 0.3 0.6 0.5 0 0.4 0.1 0.1 0.2 -0.3 0.8 -0.1
M 0.5 0.2 -0.5 -0.2 -0.3 0 0 1.2 -0.5 -0.2 -0.1 -0.7 -0.2 0.2 -0.3 -0.2 1.2 0.6 -0.7 -0.4
W 0.4 -0.9 -0.4 0.1 -0.4 -0.1 -0.6 -0.5 -0.1 -0.3 0.3 0.8 -0.2 -0.1 0.1 0.3 0.1 0.6 -0.4 -0.3
Y -0.3 0.5 0.3 0.1 -0.1 0.2 -0.7 -0.5 -0.4 0.3 -0.2 0.4 -0.2 0.2 0.2 0.7 -0.3 -0.2 -0.3 0
D 0 0.2 0.5 0.1 0.4 -0.3 1 0.1 0.6 1 -0.2 -0.3 -0.8 -0.2 -0.3 -0.9 -0.8 -0.5 0 0.7
E -0.2 0.1 0.3 0.2 0 -0.3 0.6 1 -0.2 0.2 0.1 0.3 0.7 -0.5 -0.1 -0.4 -0.7 -0.5 -0.1 -0.4
K -0.2 1.1 0.8 0.4 0.2 0.5 0.7 1 -0.4 -0.5 -1.2 -0.2 -0.1 0.2 -0.4 -0.1 0 0 -0.4 -0.7
R 0 0.8 0.5 0.2 0 0.1 0.4 0.3 -0.1 -0.8 -0.7 0.2 -0.5 0.4 0 -0.2 -0.2 -0.2 -0.2 -0.1
H 0.4 0.5 0.5 0.4 -0.1 0.6 -0.1 0.1 0.6 -0.6 -0.5 -0.4 0 -0.4 -0.1 -0.1 -0.3 -0.4 -0.8 0.7
N 0.1 0.5 0.8 0.1 0.4 -0.8 0.5 0.4 -0.6 -0.3 0.1 -0.5 -0.2 -0.3 -0.1 -0.5 -0.1 0.6 0.1 -0.4
Q -0.4 0.9 0.1 0.4 0.5 -0.1 0.7 0.8 -0.3 -0.8 -0.4 0.4 0.1 -0.1 -0.4 -0.1 -0.2 -0.9 -0.1 0
S -0.6 -0.3 -0.1 -0.2 -0.1 -0.1 0.5 -0.4 0.7 0.1 0.1 -0.2 0.6 -0.1 -0.1 0.2 0.3 -0.1 0.6 0.2
T 0.1 0 0 -0.1 -0.2 0.2 0.6 -0.7 0.4 0.4 -0.2 -0.5 0.5 0 -0.2 -0.2 -0.2 -0.2 0.3 -0.1
G -0.1 -0.3 -0.3 0.2 -0.1 -0.3 0.7 -0.4 0.8 0.3 0.1 0.1 -0.4 -0.5 -0.1 -0.3 -0.4 -0.7 0.9 1.3
P 0.2 -0.5 0 -0.8 0.2 -0.1 -0.6 -1 -0.3 0.5 -0.5 0.3 0.1 -0.2 0.5 0.1 0.6 0.7 0.8 -0.3
C -0.2 0 0 0.1 0.2 0.5 -0.3 0.2 -0.5 -0.2 0.7 0.1 0 -0.3 0.6 0 -0.8 -0.2 -0.1 0.5
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0249 0.7 0.1 -0.2 0.6 0.2 -0.9 -0.9 -0.2 -0.6 -0.1 0.5 0.5 0 -0.6 0.2 0.6 0.2 0.7 -0.6 -0.6
0251 -0.1 1.4 0.9 1.8 0.8 0 -0.1 0.7 -0.7 -0.7 -0.3 0 -0.6 -1 -0.7 0.2 0.2 -0.8 -0.3 -0.8
Select residue pair below:
i_j Score Prob
0239_0251 0.993 0.92
Local Interactions:
i_j Score Prob
0251_0253 0.799 0.75
0251_0252 0.768 0.71
0249_0251 0.759 0.70
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0145 seconds.