OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0240] and [C:0247]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.1	0.8	-0.4	-0.1	-0.2	0.2	-0.2	-0.1	-0.3	-0.3	-0.3	-0.1	0.3	-0.5	0.2	0.4	-0.2	0.4	-0.2
F	0.2	-0.1	-0.5	0.3	-0.6	0.2	0	0.5	-0.2	0.5	0	-0.1	-0.2	-0.5	0.5	0.4	-0.1	0	0.6	0.8
I	-0.1	0.3	0.8	0	1.1	-0.1	-0.3	-0.1	-0.2	-0.1	0.3	-0.7	0	-0.4	0.3	0.6	0.4	0.2	-0.5	-0.5
L	0.1	-0.3	0.6	0.4	0.8	0.1	0	-0.5	-0.1	0.3	-0.1	0	0	-0.2	-0.3	-0.1	0.1	-0.3	0.7	-0.4
V	0.2	0.2	0.5	0	1.4	-0.4	-0.1	0.1	0.3	0.1	-0.1	-0.4	0	-0.1	-0.4	0	0.4	0.4	-1	-0.4
M	-0.1	-0.3	0.4	0	0.5	0.3	0	-0.2	-0.3	-0.1	-0.3	0.3	-0.1	-0.1	0	-0.2	-0.2	-0.3	0.1	-0.3
W	0.4	0	-0.6	0.3	-0.5	0	-0.1	0.1	0	0	0.1	0.4	0	0.1	0.5	0	-0.5	0.1	0.3	1.2
Y	0	0.6	-0.4	0.6	-0.5	0.1	-0.2	0.1	-0.2	0.1	0.1	0.3	0.1	-0.1	0.3	-0.1	-0.7	0.2	1	0.4
D	0.2	-0.1	0	0	-0.3	-0.1	0	-0.1	-0.1	-0.2	0.6	-0.2	-0.1	0.3	0	0	-0.2	-0.1	-0.5	0.1
E	-0.3	0	-0.6	-0.6	-0.9	0.1	-0.1	-0.2	-0.1	0.2	0.9	0.7	-0.2	0.7	0.5	0.2	0.5	0.1	-0.8	-0.2
K	0.1	-0.1	-0.1	0.1	-0.4	0.3	0	-0.1	-0.1	0.2	-0.3	-0.3	-0.1	-0.1	-0.2	0.7	-0.2	0.1	0.2	-0.2
R	-0.1	-0.2	-0.5	0.2	0	0	-0.1	0	0.1	0.1	0.6	0	0.5	0.3	-0.4	0.2	0.2	0.1	-0.2	-0.5
H	0.2	-0.5	-0.7	0	0.4	0.1	-0.1	-0.4	0.3	0.7	-0.6	-0.3	-0.5	0.1	0.1	0.1	0.1	-0.3	0.7	0.1
N	-0.1	-0.1	-0.1	-0.1	-0.6	0.1	0	0.1	-0.2	-0.1	0	0	-0.1	0.2	0.3	-0.4	0.5	-0.1	0.2	-0.4
Q	0.4	-0.2	0.3	0	-0.5	-0.1	0	-0.1	0.7	-0.5	0.3	0	-0.3	-0.1	-0.2	-0.1	0.7	-0.1	0.1	-0.1
S	-0.2	0.1	0.4	0.1	0.9	-0.3	-0.1	-0.2	0.1	-0.6	-0.3	-0.2	0.6	-0.3	-0.1	-0.3	-0.5	-0.2	0.3	0.4
T	-0.2	-0.3	0.4	-0.4	0.6	-0.3	-0.1	-0.2	-0.1	0.3	-0.5	-0.2	0.3	0.4	0.1	0.1	0.6	-0.2	-0.4	-0.7
G	-0.4	0.3	0.2	0	-0.5	-0.1	0	0.1	0	0	0	0.9	-0.2	0	-0.3	-0.1	-0.5	0.1	-0.3	-0.2
P	-0.2	0	0	0.8	-0.4	0	0	-0.1	-0.1	0	-0.1	-0.2	-0.1	-0.1	-0.2	-0.2	0	-0.1	-0.3	-0.1
C	-0.1	0.1	-0.2	-0.1	0.3	0.1	-0.1	-0.2	0.3	-0.5	0.1	1.1	0.1	-0.4	0.3	-0.5	0.1	0.4	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0240	-0.5	1.8	1	1.6	0.9	-0.4	2.5	1.8	-1	-0.8	-1.1	-0.2	0.1	-0.9	-0.4	-0.6	-0.6	-1.1	-1.5	-0.4
0247	0.3	-0.8	0.5	0.9	0.6	-0.6	-1.6	-0.8	-0.2	0.4	0.6	0.4	-0.5	-0.2	0	0.7	0.5	-0.4	1.1	-0.9

Select residue pair below:

i_j	Score	Prob
0238_0247	1.818	1.00
0240_0247	1.352	0.99
0247_0250	0.818	0.78
0202_0247	0.763	0.70
0113_0247	0.615	0.46

Local Interactions:

i_j	Score	Prob
0247_0249	0.775	0.72
0245_0247	0.737	0.67
0247_0248	0.716	0.63

See all coupling residues
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