OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [F:0230] and [G:0231]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0.2	0.1	0.7	0.2	0.1	0.1	-0.1	0.2	0.2	-0.6	-0.5	0.2	0	0.4	-0.1	-0.2	0.3	-0.3	-0.6
F	-0.4	-0.2	-0.2	-0.4	-0.2	0.1	-0.1	-0.2	0.1	-0.2	0.3	0.5	-0.1	-0.2	1	0.1	-0.5	0	0.3	0.5
I	0.4	-0.3	-0.2	-0.1	-0.5	-0.2	-0.2	0	-0.3	0.2	-0.2	-0.2	-0.5	0.2	-0.4	0.5	0.2	1	1.6	-0.3
L	0.2	0.1	-0.4	-0.1	0.4	-0.1	-0.1	0.1	0.2	-0.1	-0.2	0.1	-0.4	-0.1	-0.7	0.1	-0.3	0.5	0.8	-0.3
V	0.8	-0.9	0.3	0.1	0.4	0	-0.3	-0.2	-0.6	0.1	-0.8	-0.6	-0.3	0.5	-0.6	0.6	-0.1	1.3	1.3	-0.1
M	0.2	0.1	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	-0.1	0	-0.1	-0.3	0.4	0.1	0.3	0.2	0	-0.3
W	0.1	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	-0.1	0	-0.3	-0.1	0.1	0	0.3
Y	-0.8	-0.2	0.2	-0.3	-0.2	-0.1	-0.1	0.5	-0.1	-0.2	0.5	0.2	-0.4	-0.6	0.8	-0.2	-0.5	0.4	0.5	0.9
D	-0.5	-0.1	0.1	-0.1	0	0	0	-0.1	0.1	-0.1	0	0.2	-0.1	0.3	0.2	-0.4	0	-0.6	-0.1	0.3
E	0.1	0	-0.1	-0.1	0.1	0	0	0	0	0	0	0	0	-0.1	0	-0.1	-0.1	0.1	-0.1	-0.1
K	-0.2	0	0.2	-0.1	-0.2	0	0	0	-0.1	0	0	0	0	-0.1	0	-0.3	0.3	0	-0.1	0.1
R	-0.5	-0.1	0.3	0.2	-0.1	-0.1	0	-0.1	0.8	0.1	-0.1	0.3	0	0.6	-0.1	-0.2	-0.1	-0.5	0.1	-0.5
H	0	0	-0.1	-0.1	-0.2	0	0	-0.1	0.4	-0.1	0.2	0.2	-0.1	-0.3	-0.1	-0.3	0.2	-0.4	-0.1	0.6
N	-0.7	0.4	0.5	0.9	0.5	0.1	0	-0.1	-0.2	0.1	0.3	0.1	0.2	-1.1	0	-0.3	0.3	-0.8	-0.2	-0.3
Q	-0.2	0.2	0.1	-0.2	0.4	0	0	0	-0.1	0	0.2	-0.1	0	-0.1	-0.1	0.2	0.2	-0.7	-0.1	-0.2
S	0.3	0.4	0.3	0.2	0.3	0	-0.9	0.9	-0.4	-0.1	0.1	0.3	0.3	0.1	-1.1	-0.2	0.1	0.3	-1.2	0.7
T	0.7	1	0.5	-0.2	0.4	-0.1	-0.7	-0.3	-0.6	0	-0.6	0.7	0.8	-0.3	-0.7	0.5	0.3	0.4	-1.4	0.5
G	0	-0.2	-0.6	0.5	0.2	-0.2	0.2	0.5	0.6	-0.1	-0.3	-0.6	-0.6	-0.4	0.9	0.4	0.1	0.2	-0.7	-0.1
P	0.9	-0.2	-0.3	-0.1	-0.3	-0.1	-0.1	0	-0.3	0.1	-0.2	-0.2	-0.1	1.2	-0.5	1.1	0.7	-1.1	-0.7	0.3
C	0.1	0	0.1	0	0.6	0.6	0.2	-0.3	-0.1	0.1	-0.3	-0.3	-0.4	-0.3	0.5	-0.1	-0.2	0.9	-0.4	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0230	0.9	0.3	0.8	1.2	1	0	-0.9	-0.3	-0.5	-0.8	-0.8	0	-0.6	-0.4	-0.4	0	0.7	0	-0.5	0.1
0231	1.4	-0.1	0.3	-0.1	1	-0.9	-1.2	-0.5	-0.1	-0.7	-0.7	-0.9	-1	0	-1	1.6	1	0.7	-0.5	0.8

Select residue pair below:

i_j	Score	Prob
0217_0231	2.669	1.00
0231_0258	1.549	1.00
0231_0261	1.343	0.99
0231_0273	0.860	0.82
0231_0235	0.577	0.40

Local Interactions:

i_j	Score	Prob
0230_0231	0.553	0.36

See all coupling residues
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