May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0229] and [L:0239]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0.7 1.2 1.3 1 0.3 -0.1 -0.9 -0.3 0.5 -0.7 0.1 -0.8 -0.6 0.3 -0.3 0.3 -1.2 -0.1 -0.3
F 0.6 -1.2 -0.5 -1.1 -0.2 0.4 -0.4 0.7 0.1 -0.2 0.5 0.5 0.6 -0.1 0.8 0.1 -0.3 0.3 -0.3 0.6
I 0 0.8 0.7 0.7 0.5 0.5 0.4 1 -0.5 -1 -0.5 -0.4 -0.3 -0.1 -0.6 0 -0.1 0.1 -0.3 -0.4
L 0.2 -0.4 0 0.9 -0.2 0.7 -0.7 0.5 0.2 -0.4 -0.3 0.2 1 0.6 0 -0.5 -0.2 0 -0.1 0.1
V 0.1 0.6 0.6 0.6 0.7 0.3 -0.1 -0.4 0.5 -0.7 -0.7 0.1 -0.3 -0.5 -0.7 -0.4 0.1 1.1 0.2 -0.2
M -0.1 0.4 0.6 0.4 -0.2 -0.1 0 0.3 -0.1 -0.4 0 -0.3 0.1 -0.1 -0.2 0 -0.5 0.5 -0.1 -0.1
W 0.4 -0.5 -0.7 -0.8 -0.7 -0.4 -0.1 0.6 -0.1 -0.4 -0.1 0.5 0 0.2 0.7 0.9 0.4 0.3 -0.1 0
Y 0.4 -0.4 -0.2 -0.9 -0.2 -0.6 -0.2 0.2 -0.2 0.6 0.3 0 -0.1 0 0.5 0.3 0.1 -0.1 -0.3 0.5
D -0.1 -0.2 -0.2 0 0 -0.1 0 -0.1 0 -0.1 0 0.2 0 0 -0.1 -0.1 -0.1 0 0 -0.1
E -0.1 -0.1 -0.5 0.1 0.2 0.1 0 -0.1 0 -0.1 -0.1 -0.1 0 0.2 -0.1 -0.1 -0.1 0 0 -0.1
K 0.2 -0.2 -0.1 -0.4 -0.1 -0.1 0 -0.1 0 -0.1 -0.1 -0.1 0.2 0 -0.1 -0.1 -0.1 0 0 -0.1
R 0.1 0.2 -0.2 -0.4 -0.2 -0.2 0 0.2 0 -0.1 -0.1 -0.1 0.2 0 -0.1 0.1 0.3 -0.1 0.1 -0.1
H 0.1 -0.1 -0.6 -0.4 0.4 0.1 0 -0.1 0 0.1 -0.1 -0.1 0 0 -0.1 0.2 0 0 0 -0.1
N 0 -0.2 -0.3 -0.1 -0.2 -0.1 0 0.2 0 -0.1 0.2 0 0 0 0 0 -0.1 0 0 0
Q -0.1 0.7 -0.5 -0.2 -0.2 0.1 0 -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0.1
S -1 0.3 0.6 0.2 0.2 -0.1 -0.4 -0.4 -0.1 1.4 -0.3 -0.5 -0.1 -0.2 -0.4 0.3 0.7 -0.2 -0.2 1
T 0 0.3 0.3 0.1 0.1 -0.6 -0.4 -0.5 0.1 0.2 0.7 0.2 -0.3 0 -0.1 0.3 0.1 -0.4 0.5 0.9
G -0.4 -0.2 0.4 0.8 0.4 0.3 -0.3 -0.6 -0.1 -0.2 0.7 0.2 -0.2 -0.1 -0.3 0.1 0 -0.3 0.3 -0.5
P -0.1 -0.1 -0.4 -0.3 -0.2 -0.1 0 0.4 0 0.2 0 0 0 0 0 0 0.1 0 0 -0.1
C -0.7 0.5 0.6 0.6 0.4 0.3 -0.4 -0.7 -0.1 0.8 -0.3 -0.2 0.1 -0.1 0.2 0 0.1 -0.4 -0.1 -0.7
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0229 0.6 0.6 1.2 1.6 1.5 0.1 0 -0.1 -1.2 -0.9 -1.1 -0.8 -1 -1.2 -1.3 0.6 1.1 0.1 -1.2 -0.1
0239 0.3 1.3 1.7 2 2.3 0.5 -1.4 0.1 -1.6 -0.2 -0.2 0 -0.8 -1.6 -0.1 0.3 0.8 -1.3 -1.4 -0.1
Select residue pair below:
i_j Score Prob
0229_0239 1.561 1.00
0239_0251 0.993 0.92
0239_0263 0.939 0.89
0226_0239 0.706 0.62
0239_0285 0.531 0.33
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.017 seconds.