May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0225] and [D:0241]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.4 -0.3 -0.4 0.6 0 -0.2 -0.3 0 0.2 0.1 0.3 -0.2 -0.2 0.3 0.2 0.4 0.4 0.1 -0.3
F -0.2 0.2 -0.1 0.3 -0.1 -0.1 -0.1 -0.2 -0.2 0.4 0.3 0.6 -0.4 0.1 0 -0.2 -0.5 -0.1 0 0.1
I -0.2 -0.1 -0.2 -0.1 -0.2 -0.1 -0.1 -0.1 0.4 0.5 0.1 -0.3 -0.4 0.1 -0.5 -0.2 1.3 -0.1 -0.1 -0.1
L 0.3 -0.1 -0.2 0.1 0.2 0.1 0 -0.3 -0.2 -0.2 -0.2 -0.1 -0.2 -0.1 0.4 0.1 0.6 -0.4 -0.5 0
V 0 -0.1 0.2 -0.1 -0.1 0.1 -0.1 -0.2 -0.2 0.2 0.1 0.3 -0.4 -0.3 -0.2 0.1 0.3 0.1 0 -0.2
M 0.3 -0.1 0 0.7 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 -0.6 -0.2 0 0.3 -0.5 0.4 -0.1 -0.1 0
W -0.2 0.2 0 -0.1 -0.1 0 0 0.2 -0.2 -0.3 0.2 -0.3 -0.2 -0.3 -0.2 0.1 0 0.1 -0.1 0
Y 0 0.2 0.2 0.6 -0.1 0.4 0.2 -0.2 0.2 0.2 -0.4 -0.3 0.1 -0.2 0.2 -0.4 -0.3 -0.4 -0.3 -0.2
D 0.3 -0.1 0.5 0 0.1 -0.2 0.2 0.1 -0.2 -0.5 0.4 0.3 0.4 -0.3 -0.1 0.1 -0.2 0 -0.2 -0.1
E -0.2 -0.3 0.4 -0.4 0 -0.1 0.3 -0.1 -0.7 -0.6 -0.1 0.4 0.9 -0.2 0.1 0.4 -0.1 0.2 -0.5 0.4
K 0.1 -0.3 0.5 -0.3 -0.3 -0.1 -0.7 -0.2 0.3 0.3 -0.4 -0.2 -0.1 0.2 0.1 0.2 -0.2 0.6 0.7 -0.3
R 0 0.3 0.3 0.5 -0.2 -0.3 -0.6 -0.5 0.7 0.1 -0.4 0.1 -0.1 0.4 -0.3 0.2 -0.1 -0.3 0.8 0.2
H 0.5 -0.2 -0.3 0 0 -0.1 -0.1 -0.4 0.5 0 -0.1 -0.1 0.1 0.6 0 0.3 -0.3 -0.2 -0.4 -0.3
N -0.2 -0.2 0 0 0.3 0.5 -0.1 0.3 0.1 -0.3 0.1 0.2 -0.3 0.1 -0.3 0.1 -0.2 -0.3 0.2 0.6
Q 0.1 -0.2 -0.3 -0.6 -0.2 0.4 -0.4 -0.5 -0.1 0.1 0.4 0.1 0.3 0.3 0.4 0.2 0.1 0.3 0.3 -0.2
S -0.1 -0.4 0.2 0.1 0.1 -0.6 -0.1 -0.3 0.1 0.1 0.3 0.2 0.1 0.2 0.1 0 0.2 0.6 -0.3 0.3
T 0.1 0.2 -0.3 -0.1 -0.1 -0.6 -0.2 0.1 0.3 -0.2 0.1 0.2 0.5 0.4 0 0.3 -0.3 0.6 -0.1 -0.3
G 0.1 0.2 -0.1 -0.2 -0.2 0.1 -0.3 0.8 0.1 0.2 0.2 0 -0.2 -0.1 -0.2 0.1 -0.1 0 0.2 -0.1
P -0.6 -0.4 -0.1 0 -0.1 0.4 -0.2 -0.2 0.5 0.3 -0.4 0.3 0.8 0.6 0.4 0 0 -0.8 0.3 -0.1
C -0.1 0 -0.1 0.4 0.3 -0.1 0.2 0.1 -0.1 0.5 -0.2 -0.4 0 -0.2 -0.2 -0.4 -0.3 -0.1 -0.2 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0225 0.2 -1.1 -1.1 -0.1 -0.4 -0.7 -1.8 -0.9 0.9 0.7 0.5 0.6 -0.3 0.9 0.3 1.2 0.3 0.8 0.6 -1.3
0241 0.1 -1.4 -0.7 0 -0.4 -1.1 -1.9 -0.8 2.2 1 0.5 0.7 0.3 1.5 0.6 1.2 0.5 -0.1 -0.6 -1.2
Select residue pair below:
i_j Score Prob
0241_0244 1.422 1.00
0241_0248 0.958 0.90
0225_0241 0.655 0.53
0241_0246 0.614 0.46
Local Interactions:
i_j Score Prob
0241_0243 1.848 1.00
0241_0242 0.733 0.66
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0188 seconds.