May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0225] and [E:0226]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.1 -0.5 0.1 0.1 0.1 -0.1 -0.2 0.4 0.3 -0.3 0.1 -0.1 0.6 -0.4 -0.2 0.7 -0.2 0.2 -0.4
F 0.1 -0.3 -0.5 -0.6 -0.6 -0.1 -0.1 0.3 0.1 -0.2 0.6 0 -0.2 0.7 0.2 0.3 -0.5 0.1 -0.3 0.1
I -0.2 0 0.1 -0.4 -0.3 0 0 -0.1 -0.6 -0.1 -0.6 -0.6 0.4 0.6 -0.1 -0.2 -0.1 1.4 0.1 0.4
L -0.2 0.1 -0.4 0 -0.1 -0.6 -0.9 -0.1 -0.2 -0.5 0.6 0.1 0.4 0.9 0.2 0.6 -0.1 0.4 0.2 -0.1
V 0.1 -0.7 0.2 -0.2 0.6 -0.6 -0.4 -0.5 -0.4 0.9 0.4 -0.1 0.5 0.7 -0.2 -0.2 -0.2 0.6 -0.1 -0.4
M 0 0.5 -0.2 -0.2 -0.1 0.2 -0.2 0.1 0.1 -0.4 0.5 0.2 0.1 -0.5 0.7 -0.7 -0.2 -0.2 -0.1 0
W -0.1 0.1 0 -0.3 -0.3 -0.2 0 -0.5 -0.2 -0.1 -0.3 -0.3 -0.2 0 0.1 0.3 0.2 0.2 -0.1 0.8
Y -0.3 0.3 -0.5 0.1 0.3 -0.3 -0.1 0.3 -0.3 -0.1 -0.5 -0.4 0.7 -0.6 0.4 0.3 0 -0.8 0.8 -0.1
D 0.1 -0.1 0.2 0.3 0.1 0.2 0.8 -0.3 -0.4 -0.1 0.3 0.2 -0.1 0.2 -0.5 -0.4 -0.2 -0.1 0.9 -0.1
E -0.1 0 0.6 0.3 0.6 -0.2 0.8 0 -0.5 0.2 -0.3 -0.3 0.1 -0.1 -0.2 0.1 0 0 0.2 -0.6
K -0.2 0.3 0.1 0.2 0.1 -0.2 0.8 0.7 -0.1 0.3 0 0 -0.2 -0.5 0.3 0.1 0.3 -0.3 -0.8 -0.3
R 0.5 0.5 -0.3 0 0 0.2 0.8 0.6 -0.3 0 -0.6 0.1 0.1 -0.3 -0.3 -0.1 0.2 -0.2 -0.2 -0.1
H -0.3 0.3 0.3 0 -0.1 0.1 0 0.1 0.2 -0.8 -0.6 -0.1 -0.4 -0.2 -0.3 0.1 0.6 0.3 0.1 -0.3
N 0.2 0.3 0.5 0.3 -0.4 0 0.7 0.2 0 0.2 0.8 0.1 -0.4 -0.5 -0.1 -0.1 -0.1 -0.8 -0.6 0
Q -0.5 0.6 0.4 0.2 0.1 0.3 0 0.3 -0.6 0 -0.2 0.2 -0.1 -0.7 0 -0.2 0 -0.1 0.1 0.1
S -0.4 -0.3 0.1 0.4 0.4 0.3 0.2 -0.7 0.6 0 0.3 0.2 -0.1 -0.2 0.2 0.1 0.1 -0.1 -0.2 0.1
T 0.2 -0.6 0 0.2 -0.1 0.6 -0.6 0.1 -0.2 0 0.5 0.8 0.1 -0.3 0.1 -0.1 -0.2 -0.8 -0.2 0.4
G 0.1 -0.3 0 0.6 0.2 0.4 0 -0.7 0.9 0.1 0 0.1 -0.4 0.1 0.1 0 -0.1 -0.4 0 -0.2
P 1 -0.3 -0.1 0.6 0 0.5 -0.4 -0.4 -0.1 0.2 0.2 -0.1 -0.6 -0.2 -0.3 0.4 0.1 0 -0.1 -0.3
C -0.4 0.5 -0.1 -0.2 0.1 -0.4 -0.3 0.4 -0.1 0.3 -0.3 0.3 -0.3 -0.4 0.1 0.3 -0.2 -0.2 -0.1 0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0225 0.2 -1.1 -1.1 -0.1 -0.4 -0.7 -1.8 -0.9 0.9 0.7 0.5 0.6 -0.3 0.9 0.3 1.2 0.3 0.8 0.6 -1.3
0226 0 0.1 -0.4 0.6 0.2 -0.8 -0.8 0.1 -0.6 0.3 0.1 0.1 0.3 0.3 0 0.6 0.5 0.2 -0.8 -1
Select residue pair below:
i_j Score Prob
0221_0225 1.212 0.98
0225_0243 0.793 0.74
0225_0241 0.655 0.53
Local Interactions:
i_j Score Prob
0223_0225 1.559 1.00
0224_0225 1.206 0.98
0225_0226 0.959 0.90
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.021 seconds.