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Coupling matrix for [H:0221] and [F:0263]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0.2 0.5 0.5 0.3 0.3 0.1 0 -0.1 -0.1 0.2 -0.2 0 -0.3 0 0 -0.2 -0.3 -0.4 0.3
F 0.4 0.5 -0.3 0.1 0.5 -0.3 -1.7 -0.5 -0.1 -0.1 0.1 0.1 -0.3 -0.2 0.1 0.5 -0.3 0.9 -0.2 -0.3
I 0.9 -1.2 -0.2 -0.3 0.3 -0.2 -1.1 -0.5 -0.2 0.3 0.4 -0.2 -0.1 0.5 0 0.6 0.8 -0.4 0.1 0.2
L 1.1 -1.1 -0.1 -0.1 0.6 -0.4 -1.7 -1.1 -0.1 0.2 0.8 0.7 -0.1 -0.2 0.2 0.7 0.6 -0.2 0.5 0.1
V 0.8 -1.2 0.1 -0.1 0.5 -0.1 -1.5 -0.1 -0.2 -0.1 0.6 -0.2 -1 -0.1 0.2 0.7 0.6 0.7 0.6 0.2
M 0.8 -0.3 -0.1 0.2 0.3 -0.6 -2 -0.6 -0.1 0.1 0.5 0.2 -0.2 0 -0.3 0.4 0.2 0.1 1.1 -0.1
W 0 -0.6 0.2 -0.3 0.1 -0.1 -0.3 0 0.2 0 0 -0.1 -0.1 0 -0.1 0.1 0.5 -0.1 -0.1 0.1
Y -0.6 0.1 -0.1 -0.1 0.1 -0.1 -0.7 0.3 -0.1 0.1 0.2 0.9 -0.2 0 0.4 -0.6 0 -0.3 -0.3 -0.4
D -0.1 0.3 0.4 0.6 -0.2 0.2 0.5 0.2 0.4 -0.2 0 -0.2 1 -0.2 -0.4 0.1 -0.7 0 0 0.1
E -0.4 0 0.6 0.2 0 -0.1 0.7 -0.1 0.2 0.1 -0.2 -0.2 -0.3 -0.1 -0.3 0 0.4 0 -0.3 -0.1
K -0.4 0.9 -0.2 -0.6 -0.5 -0.1 1.4 0.8 -0.1 -0.1 -0.2 -0.1 0.1 -0.2 -0.2 -0.5 -0.1 -0.1 -0.1 -0.5
R -0.3 1 -0.9 -0.7 -0.3 -0.3 1.4 0.5 -0.1 0.1 -0.2 -0.2 0.7 -0.2 -0.2 -0.6 -0.3 0.1 0.4 -0.1
H -0.5 0.5 0.4 0 0.1 0.1 1.1 0.5 0 -0.3 -0.5 -0.7 -0.1 0.1 0.2 -0.8 -0.1 -0.2 -0.2 0.1
N -0.2 0.3 -0.2 -0.2 -0.7 0.3 1.4 0.5 -0.1 -0.3 -0.5 -0.8 0.7 0.4 0.1 0.2 0.2 0.3 -0.3 0.1
Q -0.3 0.3 0.1 0.5 0.2 0.2 0.7 0.2 -0.1 -0.1 -0.2 -0.3 -0.4 -0.2 0.1 -0.8 -0.3 -0.4 -0.5 -0.4
S -0.2 0.8 0.3 0.1 -0.2 0.7 1 0.4 0 0.3 -0.5 0.2 -0.2 0 -0.2 -0.2 -0.6 -0.1 -0.3 -0.1
T 0.1 -0.6 0.6 0.5 0.5 0.1 -1.1 -0.4 -0.1 0.2 0.3 -0.4 -0.7 0.4 -0.3 0.4 0.3 -0.2 0.5 0.9
G -0.1 -0.3 -0.3 0.7 -0.1 1 0.3 0.5 -0.2 -0.3 -0.4 0.4 0.6 -0.1 -0.1 -0.8 0.2 -0.2 -0.3 0
P 0.2 0 -0.1 -0.5 -0.5 -0.2 -0.5 -0.3 0.3 -0.1 -0.2 0.2 0.2 0.2 0.3 0.2 -0.4 0.2 0.1 0.3
C -0.3 0.4 -0.4 0.3 -0.3 0 0.9 -0.2 -0.1 -0.1 -0.1 0.7 -0.1 -0.2 0.3 0.7 -0.2 -0.3 -0.6 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0221 0.7 -0.6 0.1 0.5 0.4 -1 -1.1 -0.5 1.2 -0.4 -1.5 -0.7 0.4 1.2 -0.6 1.8 0.4 0.3 -0.5 0.3
0263 0.5 0.6 0.6 1.1 1 0.3 -1 0.1 -0.9 -0.6 -0.3 -0.3 -0.6 -0.6 -0.2 0.3 0.1 -0.2 -0.2 0.2
Select residue pair below:
i_j Score Prob
0229_0263 1.863 1.00
0221_0263 1.507 1.00
0222_0263 1.159 0.97
0263_0285 0.988 0.92
0239_0263 0.939 0.89
0219_0263 0.847 0.81
0220_0263 0.845 0.81
0263_0271 0.739 0.67
0036_0263 0.598 0.43
Local Interactions:
i_j Score Prob
0262_0263 0.639 0.50
0261_0263 0.559 0.37
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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