OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [H:0221] and [V:0229]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.4	0.5	-0.5	-0.3	0.2	-0.8	0.1	0.6	-0.1	0.1	-0.1	-0.2	0.2	-0.1	0	0	0.2	0.2	-0.1	0.1
F	-0.1	-0.1	0.3	0.1	0.2	0.3	-0.3	-0.8	0.2	-0.1	-0.1	-0.1	-0.1	0	-0.1	-0.2	-0.5	1.2	0	0.4
I	0.1	0.2	0.4	0.5	0.7	1	-0.6	-0.9	-0.1	-0.1	-0.1	-0.1	0.1	0.2	-0.1	-0.2	-0.6	0.1	0.1	-0.2
L	0.4	0.1	0.3	0.8	0.9	0.2	-0.5	-0.1	-0.1	0.1	-0.1	-0.2	-0.2	-0.1	-0.1	-0.2	-0.1	-0.4	-0.1	0
V	0.2	0.7	0.1	0.3	0.2	0.4	-0.2	-0.1	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.7	-0.4	0.5	-0.1	0.8
M	0.3	-0.5	-0.1	0.3	0.2	0	-0.3	-0.4	0	0	0	-0.1	-0.1	0	0	0.9	0.1	-0.3	0	-0.1
W	-0.3	-0.3	-0.5	0	-0.1	-0.1	-0.1	0	0	0.2	0	0	0	0	0	-0.2	1	0.1	0	-0.1
Y	-0.1	0.5	0.6	0.4	0.1	0	-0.2	-0.6	0	-0.1	0	-0.1	-0.1	0	0	-0.1	0.4	-0.5	0	-0.3
D	0.1	0.4	0.2	-0.7	0.1	0.5	0.1	1.4	-0.2	-0.4	0	-0.3	-0.1	-0.2	-0.3	-0.3	0.1	-0.5	0.1	0.2
E	0	0.2	-0.6	-0.4	-0.4	-0.1	1.4	0.1	0	0.2	0	0.2	0.2	0	0	-0.4	-0.1	-0.2	0	-0.2
K	-0.8	-0.1	0.6	0.3	-0.5	-0.3	0.5	0	0	0	0	-0.1	0	0	0	0.2	-0.4	-0.6	0	-0.2
R	0	-0.6	0.5	-0.3	-0.1	-0.2	1.2	0.2	0	-0.1	0.1	-0.1	-0.1	0	0.1	0.4	-0.1	-0.2	0	-0.6
H	0.1	-0.1	0.3	0.1	0.3	0.4	-0.4	-0.5	0	-0.3	-0.2	-0.4	-0.2	-0.1	-0.2	0.8	0.1	0.1	0.1	0.3
N	0.2	0.6	-0.1	0.3	0	0.2	-0.3	0.6	0.1	-0.2	-0.1	-0.2	-0.2	0.1	-0.1	-0.1	-0.2	-0.4	-0.2	0.3
Q	-0.2	0	-0.4	0.5	-0.6	0	0.4	-0.3	0	0.4	0	-0.1	-0.1	0	0	0	-0.1	-0.1	0	0
S	0.2	0.2	-0.3	-0.5	0	-0.4	-0.2	0.8	-0.2	-0.4	-0.1	-0.1	0.3	-0.3	0.6	0.8	0.7	-0.2	-0.1	0.2
T	-0.1	-0.3	0.3	-0.3	0.4	-0.2	-0.1	-0.4	-0.1	-0.2	-0.2	-0.2	-0.3	-0.1	-0.3	0.4	1	-0.3	-0.1	0.4
G	0.1	-0.1	-0.8	0.5	-0.6	-0.1	-0.2	0.7	-0.1	0.1	-0.1	1.2	0.1	0.2	-0.1	-0.4	-0.3	0.8	-0.1	-0.4
P	-0.7	-0.1	0.8	0.6	-0.1	-0.2	-0.3	-0.7	0.2	0	0	0.2	-0.1	0	0	-0.2	-0.2	0.1	0	-0.1
C	0.6	-0.3	-0.2	-0.5	0.2	-0.2	-0.1	0.4	-0.1	0.1	0.2	-0.1	-0.1	0	0.2	0.3	0.2	-0.3	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0221	0.7	-0.6	0.1	0.5	0.4	-1	-1.1	-0.5	1.2	-0.4	-1.5	-0.7	0.4	1.2	-0.6	1.8	0.4	0.3	-0.5	0.3
0229	0.6	0.6	1.2	1.6	1.5	0.1	0	-0.1	-1.2	-0.9	-1.1	-0.8	-1	-1.2	-1.3	0.6	1.1	0.1	-1.2	-0.1

Select residue pair below:

i_j	Score	Prob
0221_0263	1.507	1.00
0221_0225	1.212	0.98
0221_0229	0.807	0.76
0221_0226	0.615	0.46
0221_0224	0.536	0.33

Local Interactions:

i_j	Score	Prob
0221_0223	2.497	1.00
0221_0222	1.590	1.00

See all coupling residues
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