May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [W:0220] and [F:0228]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0.2 0.1 0.1 0 -0.4 0.2 0.4 0.2 -0.1 -0.1 0.1 0.1 -0.1 -0.1 -0.4 0.3 0.3 0.1 -0.5
F 0.2 -0.1 0.5 0.4 0.4 0.4 -0.3 -0.5 -0.4 0.2 -0.5 0.1 -0.1 0.2 0.5 0.1 -0.6 0.2 -0.6 -0.2
I 0.6 -0.2 0.6 0.3 0.3 0.3 -0.3 0 -0.1 -0.2 0.1 0 -0.4 -0.2 -0.5 -0.4 0.1 -0.4 -0.4 0.8
L 0.5 0 -0.3 0.5 -0.2 0.3 -0.2 0.3 -0.2 -0.2 -0.2 -0.2 -0.1 0.4 0.1 -0.1 0.1 -0.1 -0.5 0.4
V 0.5 -0.5 0.5 0 0.5 0.6 0.1 0.1 -0.2 -0.2 -0.2 -0.4 -0.1 -0.2 -0.4 -0.2 -0.1 0.1 -0.3 0.5
M 0.1 0.4 -0.7 0 -0.2 -0.3 -0.6 0.3 -0.1 -0.1 -0.1 0.1 -0.2 -0.1 -0.2 -0.2 -0.5 0.2 2 0.3
W 0 1 0.6 0.4 0.2 0.2 -0.1 -0.6 0 -0.3 0 -0.1 0.1 -0.5 -0.1 0.6 -0.4 0 0 -1
Y 0 0.2 1.2 0.7 0.5 -0.1 0.1 -1 -0.1 -0.1 -0.2 -0.3 -0.1 -0.2 0.1 -0.3 -0.2 0 -0.4 0.1
D 0.3 -0.2 0.1 -0.2 -0.5 -0.1 0 0 0 0 0 0 0 0 0 0.5 0.3 0 0 -0.1
E 0.1 -0.2 -0.5 0.1 -0.3 0.5 -0.1 -0.2 0 0 0 0 0 0 0 0.2 0.1 0 0 0.6
K -0.4 0.7 0.2 -0.5 -0.2 -0.3 -0.1 -0.2 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0.1
R -0.7 1.3 0.1 -0.3 0.1 -0.5 -0.1 0.1 0 0 0.1 -0.1 -0.1 0 -0.1 0.1 -0.2 -0.1 -0.1 -0.3
H 0.2 -0.1 0.1 0.5 -0.1 -0.4 -0.1 0 0 0 0 0 0 0 0 0.1 -0.2 -0.1 -0.1 0.1
N -0.3 0.2 -0.3 0.2 0.1 -0.2 0 -0.1 0 0 0 0 0 0 0 0.2 -0.1 0 0 -0.1
Q 0.2 0.2 0 0 -0.6 -0.1 -0.1 0.4 0 0 0 0 0.1 0 0.2 -0.1 0.3 0 0 -0.1
S -0.7 -0.1 -0.1 0.2 0.2 -0.3 0 0.2 -0.1 -0.1 0.2 -0.1 0.5 -0.1 -0.1 0.2 0.7 -0.2 0 -0.6
T 0.2 -0.2 0.1 0 0.4 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.2 0.7 -0.2 -0.1 0.5
G 0.3 -0.8 -0.5 0.2 0.1 0.4 0.5 -0.3 0 0.2 0 0 0 0 0.2 0.1 -0.1 -0.1 -0.1 -0.1
P -0.3 0.1 -0.6 0.4 -0.2 0.1 0.3 0.5 0 0 0 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0.3
C 0 0.2 -0.1 -0.8 0.3 0 1 1.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0220 0.7 0.7 0.4 0.8 0.9 0.2 -0.3 0.1 -0.6 -0.4 -0.6 -0.8 -0.1 -0.6 -0.2 0 0.3 -0.3 0 0
0228 1.2 2 2 2.5 2.1 0.9 -0.6 0.7 -1.9 -1.7 -1.6 -1.4 -1.2 -1.7 -1.2 -0.4 -0.2 -0.9 -1.1 0.2
Select residue pair below:
i_j Score Prob
0184_0228 1.585 1.00
0220_0228 0.605 0.45
Local Interactions:
i_j Score Prob
0227_0228 0.890 0.85
0228_0229 0.739 0.67
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0172 seconds.