May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0194] and [W:0220]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.4 0.3 0.4 0.6 -0.4 -0.6 0.3 0.4 0.1 -0.3 0.1 0.1 -0.3 -0.1 0.1 -0.1 -0.3 0.4 0
F -0.2 -0.3 -0.2 0.7 0 0.7 0.3 0.3 0.2 0.1 -0.4 -0.5 0.1 0.3 -0.1 0 -0.1 -0.8 0.1 0.1
I -0.4 0.3 0.3 0.2 0 -0.1 1 0.3 -0.1 -0.2 0.2 -0.1 -0.2 0.3 0.3 0 -0.4 0.1 -0.4 0.1
L -0.3 0.8 0.2 0.5 0 0.5 0.5 -0.2 -0.6 0.1 -0.4 0.1 0.3 -0.1 0.1 -0.1 -0.1 0 0.1 -0.3
V -0.2 0 0.4 0.5 0.2 0.1 0.6 0.4 0 -0.1 0.2 -0.4 -0.2 0 -0.2 0.2 0.1 0.6 -0.1 -0.2
M -0.4 0.3 0.5 -0.1 0.4 0.1 -0.1 -0.2 -0.2 -0.3 -0.4 -0.4 -0.5 0.4 0.5 0 0.7 -0.5 -0.2 0.3
W 0.3 0 -0.2 0.2 -0.1 0 -0.6 -0.6 0 -0.1 0 0 0 0 -0.1 0.1 0.7 -0.1 0 -0.2
Y 0.2 0 0.2 0.4 0.3 0.9 0 -1.2 -0.1 -0.1 -0.2 -0.3 -0.2 -0.1 0.2 0 -0.1 0.3 0.1 -0.4
D 0.6 0.3 0.1 -0.6 0.1 -0.1 -0.6 -0.1 0 0 0 0.3 -0.1 0 0 -0.1 -0.2 -0.1 -0.1 -0.2
E -0.1 -0.4 0.7 0.8 0.2 -0.1 -1.5 0.2 -0.1 -0.1 0.1 -0.1 -0.3 0 -0.1 0.1 -0.4 1.2 -0.1 -0.1
K 0 -0.3 0.1 -0.2 0.2 -0.5 0 0 0.2 -0.2 0.3 -0.8 -0.4 0.2 -0.1 -0.1 -0.3 -0.1 0.5 1.2
R 0.5 0.4 0.2 0 0 -0.6 -0.4 -1 -0.2 0.7 -0.3 -0.5 0.3 -0.2 -0.1 0.6 0.5 -0.4 -0.2 0.4
H 0.5 -0.2 -0.8 0 0.1 -0.3 0.7 0.7 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.4 0.3 -0.1 -0.3 0
N -0.1 -0.2 -0.3 -0.7 -0.4 -0.2 -0.1 -0.5 0.2 0.2 0.2 1.2 -0.1 0 -0.1 -0.1 0 -0.1 -0.1 -0.1
Q 0.4 0.1 -0.2 -0.1 0.4 0.5 -1 0.5 -0.2 -0.3 0.1 -0.5 0 -0.2 -0.3 0.2 0 0.8 -0.3 0.2
S -0.3 -0.3 -0.2 -0.7 -0.3 0.2 -0.2 0.6 -0.2 0 0.2 0.8 0.3 -0.2 -0.1 -0.7 0.2 0.2 1 -0.1
T 0.3 -0.1 -0.1 0 0 -0.3 -0.6 0.5 0.3 0.4 -0.1 0.3 0.4 -0.2 -0.1 0 0.2 -0.5 -0.2 0.2
G 0 0.5 -0.3 -0.4 -0.5 -0.4 1 0.4 -0.1 -0.1 0.1 0.6 -0.1 -0.1 0.2 0 -0.1 -0.3 -0.5 -0.1
P -0.3 0.1 0 -0.4 -0.8 0.1 1.3 -0.1 0 0 0 -0.1 -0.1 0 0 -0.2 -0.2 -0.1 -0.1 -0.2
C -0.3 -0.7 -0.1 0 0 0.2 -0.1 0.1 0.3 -0.3 0.3 -0.1 0.5 0.2 0.1 -0.3 0.1 0 0.6 -0.5
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0194 0.3 0.4 1.8 1.9 2 0.4 -1.2 -0.4 -1.4 -0.3 0 0.1 -0.8 -1.2 -0.1 0.5 0.8 -0.7 -1.8 0.5
0220 0.7 0.7 0.4 0.8 0.9 0.2 -0.3 0.1 -0.6 -0.4 -0.6 -0.8 -0.1 -0.6 -0.2 0 0.3 -0.3 0 0
Select residue pair below:
i_j Score Prob
0184_0220 2.294 1.00
0176_0220 1.586 1.00
0177_0220 1.044 0.94
0174_0220 0.960 0.90
0220_0242 0.887 0.85
0220_0263 0.845 0.81
0194_0220 0.821 0.78
0175_0220 0.684 0.58
0036_0220 0.676 0.57
0220_0228 0.605 0.45
0182_0220 0.572 0.39
Local Interactions:
i_j Score Prob
0219_0220 0.773 0.72
0218_0220 0.756 0.69
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0276 seconds.