May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0184] and [V:0227]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 -0.3 0.3 0.8 0 -0.2 0.4 0.2 -0.4 0.2 -0.3 -0.1 0.4 -0.1 0.4 0.2 0.3 -0.6 -0.6 -0.5
F -0.4 0.5 0.2 0.4 0.3 -0.6 -0.2 -0.1 -0.2 0.2 -0.3 -0.1 0.7 0.2 -0.6 0.2 -0.5 0.1 0.1 0.6
I -0.1 0.3 0.3 -0.1 0.2 -0.4 0.5 0.2 0.1 -0.3 0.8 0 -0.1 0.2 -0.5 0.1 0 -0.3 -0.4 0.4
L 0.6 0.5 0 -0.4 0.3 -0.1 0.6 0.6 -0.2 0.7 0.5 -0.1 -0.2 -0.8 -0.5 0.1 -0.3 0.6 -0.5 0.1
V 0.3 0.1 0.6 0.2 0.4 -0.3 0.1 -0.1 -0.2 -0.2 0.2 0.1 0.1 -0.1 -0.6 -0.5 0.2 0 -0.2 0.4
M -0.2 0.1 0 -0.4 0 -0.4 -0.1 0.6 -0.1 0.1 0.7 0.1 -0.2 1.8 0.1 -0.1 -0.3 -0.3 -0.2 -0.4
W -0.5 0.6 -0.5 0.6 0.6 0.3 -0.1 0 0 -0.1 -0.2 0 -0.2 -0.2 0 -0.1 0.1 0.1 0 -0.2
Y -0.7 -0.1 0.2 0.4 0.1 -0.7 -0.5 -0.4 0 -0.5 0 1.6 0.1 -0.3 -0.7 0.9 0 0.1 0.5 -0.1
D 0.2 -0.1 -0.2 0 0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0
E 0.4 -0.1 -0.3 -0.3 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0.1 0
K -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.1
R -0.1 0.1 -0.3 -0.2 0.4 -0.1 0 -0.1 0 0 0 0.1 0.1 0 0.2 0 -0.1 0 0 0
H -0.2 -0.5 -0.7 -0.7 -0.6 2.1 0 -0.2 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.4 0 0
N -0.1 -0.2 -0.4 -0.2 -0.4 0.7 0 -0.1 0 0 -0.1 0.2 0 0 -0.1 0 -0.1 -0.1 0 -0.1
Q 0.2 -0.1 -0.2 -0.2 -0.2 0.2 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0
S 0 0 0.9 0.7 0.4 -0.4 0 -0.3 -0.1 0 -0.4 -0.3 0 -0.3 1.2 -0.3 -0.5 -0.3 -0.1 -0.4
T 0.1 1 0.3 0.2 -0.5 -0.2 -0.3 -0.1 -0.1 -0.2 -0.3 -0.3 0.1 -0.2 -0.2 -0.1 0.2 0.2 -0.1 0.2
G 0.8 -0.1 0.4 -0.1 0.3 0.4 -0.4 0 0.1 -0.3 -0.1 -0.4 -0.2 -0.3 0.9 -0.3 -0.2 -0.1 -0.1 -0.3
P 0.1 -0.1 0.1 0.2 -0.3 -0.1 0 0.1 0 0.2 0 -0.1 0 0 0 0 -0.1 0 0 0
C 0.3 -0.6 0.8 0.4 0.2 0.7 -0.6 -0.7 -0.2 -0.4 -0.7 -0.5 -0.6 -0.4 -0.2 -0.2 2 0.1 0.5 0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0184 0 0.8 1.6 2.2 1.5 0.8 -0.2 0.3 -0.9 -0.5 -1 -0.5 -1.4 -0.9 -0.8 0.5 0.3 -0.4 -0.6 -0.6
0227 0.5 0.9 1.8 2.5 1.8 0.5 -1 0.3 -2 -1.1 -0.7 -0.4 -0.5 -1 -0.4 -0.8 0.4 -0.8 -1.8 -0.6
Select residue pair below:
i_j Score Prob
0184_0227 0.825 0.78
Local Interactions:
i_j Score Prob
0227_0228 0.890 0.85
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.032 seconds.