May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0176] and [P:0177]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.1 -0.3 0 0.1 -0.2 -0.4 0.2 0.7 -0.4 0.5 0.1 -0.1 -0.3 -0.5 -0.1 0 0.2 0.6 -0.1
F -0.3 0.2 -0.2 0.1 -0.3 0 -0.2 -0.5 0.4 0.3 0 0 0.4 0.6 -0.1 0.2 0.1 -0.9 0.3 0.3
I -0.5 -0.1 -0.5 -0.2 -0.5 -0.3 0 0.1 1.1 0.5 0 -0.3 0 0.8 -0.1 0 -0.4 0.2 -0.1 0
L 0.2 0.4 -0.3 -0.5 -0.3 -0.1 -0.4 0.2 0.3 0.5 -0.5 0.3 -0.1 -0.1 -0.1 0.4 0.1 0 0.3 -0.3
V -0.3 -0.4 -0.6 -0.1 0 0.1 0.3 0.2 1.3 0.4 -0.9 0 -0.2 0.3 0.1 -0.3 -0.4 0.6 -0.1 0.3
M -0.2 -0.3 0.1 0.7 -0.3 0.1 -0.1 -0.2 0.2 -0.7 0.5 0.1 0.4 0 -0.5 0.3 -0.1 -0.4 0.3 -0.2
W -0.4 -0.2 -0.1 -0.4 0 -0.1 -0.1 -0.2 -0.6 -0.3 0.1 1 -0.4 -0.4 1.5 0.1 -0.3 0.1 -1 0.2
Y -0.7 0.1 -0.1 -0.2 0.1 0.2 -0.1 -0.2 0.5 0.1 0.5 -0.3 -0.4 0.3 -0.2 0 -0.2 0.3 0 -0.3
D 0.6 -0.3 0.5 -0.2 0.4 -0.9 0 0.1 -0.5 0.4 -0.2 0.3 -0.5 -0.2 0.4 0.2 0 0 0.3 -0.4
E -0.5 -0.1 0.1 0.2 -0.4 0.3 -0.2 0.1 0.1 0.5 0.1 0.2 -0.6 0.3 -0.1 0 0 0.2 0.2 -0.2
K 0.4 0.1 -0.3 -0.3 -0.2 -0.2 -0.1 0.2 1 -0.5 -0.1 -0.4 0.1 0.3 -0.5 0.2 -0.1 0.7 -0.2 -0.3
R 0.4 -0.3 -0.4 -0.4 -0.6 -0.3 -0.2 -0.2 0.2 0.5 0.4 -0.5 0 0.7 0.1 0.4 -0.4 0.8 -0.5 -0.2
H 0 -0.4 0.2 0.2 0.1 -0.4 -0.5 0.3 -0.8 0.1 0 -0.2 0.8 -0.8 -0.1 -0.2 0 0.2 1.6 0.3
N 0 0.3 -0.1 -0.3 -0.4 0.1 1.2 0.1 -0.4 -0.3 0.2 0.4 0.5 -0.1 0.5 0 0.3 -0.7 -0.1 0.1
Q 0.2 -0.5 -0.2 -0.4 0.2 0.1 0 -0.5 0.1 0.3 0.3 -0.2 -0.7 0.2 -0.2 -0.1 -0.1 0.7 -0.2 1.1
S 0.5 -0.1 0 0.4 0 -0.4 -0.1 0.6 -1 -0.2 0 0.2 0.5 -0.2 0.2 0.2 0.2 -0.4 0.8 -0.2
T 0.6 0.2 -0.3 0.1 0.2 0.3 -0.2 -0.3 0 -0.4 0.1 -0.1 0.3 0 0.3 0.4 0 -0.3 0.7 -0.4
G -0.2 0.7 0.8 0.3 0.5 0.2 -0.1 0.3 -0.6 -0.4 -0.5 -0.2 0.2 -0.5 -0.8 -0.6 0.3 0.6 -0.4 -0.1
P 0.3 0.1 0.1 0.1 0.2 0 -0.2 0.4 -0.1 0.2 0.1 0.1 0.4 -0.4 0.4 0.1 0.4 -0.7 -0.6 -0.3
C 0 0 -0.1 -0.1 0 0.9 -0.1 -0.5 -0.3 0.2 -0.1 0 -0.3 0.1 0.2 -0.3 0.2 0 0.2 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0176 0.4 0 -0.3 0.5 -0.2 -0.7 -1.3 -0.5 0.7 -0.4 -0.9 -0.8 0.2 1.4 -0.1 1.5 0.3 0.2 -0.3 0.1
0177 0.6 -1.2 -1 -0.1 -0.5 -1.1 -2 -0.6 0.9 0.4 0.3 0.3 0 0.4 0.2 1.3 0.4 0.8 1.6 -1.2
Select residue pair below:
i_j Score Prob
0177_0220 1.044 0.94
0177_0224 0.931 0.88
Local Interactions:
i_j Score Prob
0176_0177 1.521 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.015 seconds.