OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [A:0175] and [F:0183]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.2	-0.1	-0.2	0.2	-0.3	-0.5	-0.2	-0.1	-0.1	0	0.1	-0.1	0.1	0.2	-0.1	-0.1	0.1	0.3	1.2
F	0	0.9	0.5	0.6	0.1	0.4	0.8	0.7	-0.2	0.1	-0.2	-0.4	-0.4	-0.1	-0.5	0.7	-1.1	-0.4	-0.6	0
I	0.7	-0.2	0.2	0.1	0.1	0.3	-0.6	0.2	0.1	-0.3	-0.1	0.1	-0.3	-0.4	-0.1	-0.2	0	0.9	0.4	0.1
L	0.8	-0.7	-0.5	0.4	-0.1	0.1	0.1	-0.6	0	0.1	-0.3	0.2	0.5	0.5	-0.1	0.1	0.2	-0.2	-0.6	-0.2
V	0.7	-0.3	0.2	-0.1	0.4	0.3	-0.3	-0.2	-0.3	-0.1	-0.1	-0.3	-0.1	0	-0.3	-0.3	0.7	1.1	-0.1	-0.1
M	0.8	0	0	-0.2	0.1	0.2	0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0.1	0.4	0.2	-0.1
W	-0.6	1.4	0.6	0.9	0	0.1	-0.1	0	-0.1	-0.1	-0.1	-0.2	-0.3	-0.1	-0.1	-0.7	-1	-0.6	-0.5	-0.6
Y	-0.3	0.7	0.8	0.5	0.2	-0.3	0	0.7	0.1	-0.2	-0.2	-0.2	-0.2	-0.2	-0.2	0	-0.1	-0.5	-0.3	-0.3
D	-0.4	-0.1	-0.1	-0.1	-0.4	-0.2	0.6	-0.3	0	0	0	0.4	0	0	0	0	0.3	-0.1	0.2	-0.1
E	-0.2	-0.2	0.1	-0.5	0.2	-0.2	0	0.1	0	0	0	0	0.2	0	0.2	0.2	0.1	-0.1	0	-0.1
K	-0.5	0.4	0.2	0.2	0	0.1	0	-0.4	0	0	0	0	0	0	0	0	-0.1	-0.1	0	-0.2
R	0	-0.2	-0.6	-0.2	-0.1	0.1	0	0.5	0	0	0	0	0	0.2	0	0.2	0.2	0.1	0	-0.2
H	-0.3	0.1	0.1	0.2	-0.1	-0.2	-0.1	-0.1	0	0.2	0	0	0	0	0	0.2	0.1	-0.1	-0.1	0
N	-0.3	-0.1	-0.1	0.3	0.2	-0.2	0.2	-0.1	0	0	0	0	0	0	0	0	-0.1	-0.1	0	-0.1
Q	-0.6	0	0.6	0.3	0	0.5	-0.1	-0.5	0	0	0	0	0.2	0	0	-0.1	-0.1	0.1	-0.1	-0.3
S	0.2	0.1	0.1	0	0.2	0	-0.4	0.3	-0.1	-0.1	-0.1	0.2	-0.1	0.1	0.3	0	-0.5	-0.3	-0.3	0.7
T	0.3	0.4	-0.1	-0.2	0.2	0	-0.3	-0.2	-0.1	-0.1	0.1	-0.1	0.1	-0.1	0.2	0	0.6	-0.1	0	0.7
G	-0.3	0	-0.1	0.3	-0.1	-0.4	0.2	0.1	0	0	0	0	0.2	0	0	-0.1	0.2	-0.1	-0.1	-0.1
P	0	-0.4	0	-0.2	-0.1	0.2	-0.2	0.6	0	0	0.2	-0.1	-0.1	-0.1	0	0	0.7	-0.2	0.1	-0.1
C	0.6	0	-0.1	-0.7	0.3	-0.1	0.3	0.1	0.2	-0.1	-0.1	0.1	-0.1	-0.1	-0.1	-0.2	-0.5	-0.5	1.2	0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0175	0.6	0.7	0.7	1	1	0.3	-0.4	0.1	-0.6	-0.7	-0.5	-0.4	-0.5	-0.7	-0.9	0.2	0.7	-0.7	0	-0.1
0183	1	1.8	2.3	2.8	2.2	0.7	-0.8	0.7	-1.2	-1.1	-1.2	-1	-1.1	-1.1	-1	-0.8	-0.3	-1.1	-0.6	0

Select residue pair below:

i_j	Score	Prob
0141_0175	2.251	1.00
0134_0175	1.717	1.00
0175_0197	1.222	0.98
0135_0175	1.207	0.98
0175_0183	0.950	0.90
0088_0175	0.827	0.79
0133_0175	0.754	0.69
0151_0175	0.699	0.60
0175_0220	0.684	0.58
0132_0175	0.681	0.57

Local Interactions:

i_j	Score	Prob
0173_0175	0.657	0.53
0174_0175	0.646	0.52

See all coupling residues
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