OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [C:0172] and [C:0186]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.7	0.4	-0.2	0	0.2	0	-0.3	-0.2	-0.3	-0.3	0.5	0.1	0.8	-1.2	-0.1	0.2	0	0.9	-0.2	-0.2
F	0.2	-0.2	-0.1	0.1	-0.1	0.1	-0.1	-0.2	-0.2	0.1	-0.1	0	-0.1	1.1	-0.1	0	-0.2	0.2	-0.2	-0.3
I	-0.4	-0.1	-0.1	0	0	-0.1	-0.2	0.1	0.2	0.3	-0.1	0.4	-0.1	-0.3	-0.1	0	-0.6	0.2	-0.1	0.3
L	-0.2	0.6	0.2	0.1	0.2	0.2	-0.3	0.2	0.6	0.1	0.1	0.1	-0.1	0.4	0	-0.6	-0.1	-0.8	0.2	-0.5
V	0.6	-0.2	-0.5	-0.7	-1	0	-0.1	0.2	0.4	0.1	0.1	0.5	0	-0.1	0.2	-0.2	-0.5	1.4	0	-0.3
M	0.3	-0.1	-0.3	-0.1	0.1	-0.1	-0.1	0.3	-0.1	0.2	-0.1	0.1	-0.1	-0.1	-0.1	0	-0.5	-0.9	-0.1	0.9
W	0.1	-0.1	0.8	0.2	0.3	0.1	-0.1	-0.1	-0.1	0	0	-0.1	-0.1	0	-0.1	0	-0.6	-0.9	-0.1	0
Y	0.2	-0.2	-0.4	-0.2	-0.6	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	1.4	-0.1	0.2	0.1	-0.3	-0.1	0.5
D	0.1	-0.5	0.6	0.5	1	0.7	0.4	-0.3	-0.4	-0.2	-0.1	-0.9	-0.7	-1.2	-0.6	0.2	0.6	-0.5	1.3	0.6
E	-0.1	0	0	-0.6	0.1	0	-0.3	0	-0.2	-0.1	-0.1	1	0.1	0.2	-0.2	-0.6	0.5	-0.3	-0.1	0.4
K	0.1	-0.1	0.3	0.1	0.2	0.6	0.5	0.3	-0.3	0	-0.2	-0.4	-0.2	0	0.2	-0.3	-0.3	-0.7	-0.3	0.4
R	0.1	-0.3	-0.2	-0.1	0.8	-0.4	0.4	-0.3	0.6	-0.2	0	-0.5	0.2	0.7	0.4	-0.8	0.3	-0.7	0.2	0
H	0.2	-0.2	-0.4	0.9	-0.2	-0.1	-0.5	-0.3	0.9	-0.2	0.1	-0.1	-0.2	0.3	-0.1	1.1	0.3	-0.4	-0.3	0
N	-0.3	-0.3	0	-0.1	-0.1	-0.2	1	-0.1	-0.3	-0.2	-0.1	-0.2	0	0.3	0	0.5	0.4	-0.4	-0.2	0
Q	0.2	-0.4	1.1	0.2	0.9	-0.2	-0.7	-0.2	-0.3	0	-0.2	0	-0.2	0.1	-0.4	0.3	-0.1	-1.1	-0.1	0.3
S	0.2	0.7	-0.1	0.2	-0.1	-0.2	0.2	-0.1	-0.1	-0.1	-0.2	-0.3	-0.1	-0.2	-0.4	0.6	0.4	1.1	-0.2	-0.3
T	-0.1	-0.1	0	0.4	-0.8	-0.2	-0.6	-0.1	0.4	-0.3	0.1	0.1	0.5	-0.2	0	0.1	0.9	1.4	-0.4	-0.3
G	-0.2	0.5	0.1	0.2	-0.2	0.2	0.9	0.7	-1.1	0.4	-0.3	-0.5	0.1	-0.6	1.7	0.1	0.1	-0.6	-0.2	0.2
P	-0.6	0.3	-0.2	-0.4	0.3	0.2	-0.2	-0.1	0.3	-0.1	0.2	0.1	-0.1	-0.3	0.1	-0.1	-0.1	-0.1	0.3	-0.5
C	0.5	0.2	-0.6	-0.3	0.1	-0.5	-0.4	-0.2	-0.2	-0.4	-0.3	0.1	0	-0.5	-0.5	0.6	0.6	2	-0.3	0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0172	0.9	-0.2	-0.3	0.3	-0.2	-1	-1.2	-0.5	0.5	0.1	-0.4	-0.3	0.1	0.4	-0.3	1.5	0.4	1.1	-0.4	0.2
0186	1.6	-0.5	0.3	0.6	0.9	-0.4	-1.2	-0.7	-0.5	-0.9	-0.8	0	-0.7	-0.3	-0.9	1.3	1.3	0.3	-0.9	0.8

Select residue pair below:

i_j	Score	Prob
0172_0186	2.859	1.00
0172_0217	0.907	0.86
0130_0172	0.816	0.77
0172_0218	0.806	0.76

Local Interactions:

i_j	Score	Prob
0172_0174	1.086	0.96
0172_0173	0.605	0.45
0171_0172	0.598	0.43

See all coupling residues
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