May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0165] and [A:0167]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.5 -0.1 -0.8 -0.3 -0.1 -0.4 -0.2 0.8 0.5 0.1 0.5 -0.2 0.2 0.1 0.4 -0.1 0.6 0.1 -0.5
F 0.3 -0.1 0.3 0.2 1 -0.1 -0.2 -0.2 -0.2 0 -0.6 0 0.3 0.8 0 0.3 -0.3 -0.4 -0.5 -0.3
I -0.1 -0.3 -0.8 -0.6 -0.1 0 0.2 0.5 0.6 0.4 -0.2 0.2 0.1 0.6 0.2 0 -0.5 0.2 -0.5 -0.2
L -0.5 -1 -0.2 -0.2 -0.4 -0.2 -0.1 0.3 0.4 0.5 0.1 0.1 0.8 0.2 0.1 0.1 0.5 -0.3 0.5 -0.3
V -0.2 -0.3 -0.4 -0.2 -0.2 -0.4 -0.3 -0.1 0.8 0.2 -0.1 -0.2 0.8 0.1 0.5 0 0.1 0.7 -0.3 -0.3
M -0.3 0.1 -0.5 -0.4 0.1 0 -0.1 0.2 -0.1 0 0 0.4 -0.1 1.4 0.7 -0.2 -0.6 -0.7 -0.1 -0.2
W 1.4 0.1 -0.2 -0.6 0.3 -0.3 -0.1 -0.3 -0.8 -0.3 -0.4 -0.4 1.4 -0.6 -0.3 0.5 -0.2 -0.4 0.1 -0.1
Y 0.3 -0.1 -0.3 0 -0.5 -0.2 -0.1 -0.3 0.3 0 -0.4 0 0.1 -0.2 -0.2 0.7 0.4 -0.2 -0.6 -0.2
D -0.2 0.2 0.3 0.4 0.1 -0.1 -0.1 -0.3 -0.1 0.1 0.3 -0.1 -0.6 0 0 0 0.5 0.1 0 0.2
E 0.2 0 0.1 0.1 -0.7 0.7 0 -0.5 -0.2 0.3 0.6 -0.3 -0.3 -0.2 -0.2 -0.2 0.4 -0.1 0.6 -0.1
K 0.2 0 0.3 -0.2 0.1 0.2 -0.3 0.4 0 0.4 0.2 0.1 -0.3 0.1 -0.6 -0.3 0.1 -0.2 0 -0.4
R -0.5 0.4 0.4 0.6 0 -0.6 -0.1 1 0.4 -0.1 -0.2 -0.2 -0.7 -0.3 -0.5 -0.2 -0.1 1 0.4 -0.2
H -0.4 1.2 -0.2 0.9 -0.5 0.1 0 0.2 0 -0.8 0.1 -0.1 0.1 -0.4 -0.1 -0.1 -0.3 0 -0.5 0.3
N -0.4 0.3 0.1 -0.1 0.4 -0.7 -0.2 0.5 -0.2 0 0.1 0.2 -0.5 0.3 -0.1 -0.2 0 0 0.2 0.1
Q -0.2 0.8 0 0.6 -0.1 -0.2 0 -0.7 0.2 0.1 -0.1 -0.1 0.1 -0.1 0 -0.1 0.1 -0.1 0.7 -0.5
S 0 0.1 0.4 0.2 0 0.1 0 -0.6 -0.2 -0.1 -0.3 -0.3 -0.3 -0.1 0.1 -0.1 0.1 0.1 0.5 0.8
T -0.4 -0.5 -0.4 0.6 -0.4 0.3 -0.1 -0.4 -0.4 -0.1 0.1 -0.2 0.1 -0.5 0.8 0.1 0.1 0.6 0.8 0.1
G 0 -0.1 0.5 -0.1 0.3 0.4 -0.1 -0.6 -0.5 0.2 0.4 0.7 -0.5 -0.2 0.2 0.1 0.4 0.3 -0.8 -0.3
P 0 -0.5 -0.3 0 0.2 0.3 0 1.5 -0.4 -0.3 0.3 0.1 0.5 -0.3 -0.4 -0.2 0 -0.3 0.3 0.4
C 0.8 0.1 -0.1 -0.8 0.6 0 0.1 -0.1 0.1 -0.5 -0.1 0 -0.7 0 0 -0.1 -0.7 0 -0.2 0.3

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0165 0.3 -0.3 0.1 0.6 0.3 -1.2 -2.4 -1.3 0.6 0.3 0.1 0.4 -0.5 0.2 0.3 0.9 0.6 0.6 0.6 -0.7
0167 0.8 -0.7 -0.8 0.1 -0.3 -1.1 -2.5 -1.2 0.9 0.7 0.8 0.4 -0.3 0.7 0.3 1.2 0.8 1 0.6 -1.6
Select residue pair below:
i_j Score Prob
0165_0195 0.878 0.84
0165_0193 0.635 0.50
Local Interactions:
i_j Score Prob
0165_0166 1.396 0.99
0163_0165 0.848 0.81
0164_0165 0.710 0.62
0165_0167 0.650 0.52
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0172 seconds.