May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [C:0148] and [K:0150]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0.6 0.1 0.1 0.2 0.1 -0.4 -0.2 0.1 0.6 -0.1 0.1 0.3 -0.2 -0.2 -0.3 -0.4 0.2 -0.1 -0.2
F -0.7 -0.2 -0.2 -0.7 -0.9 -0.3 -0.7 0.4 0.3 1.1 0.3 -0.1 0.3 0.3 0.7 0.3 -0.2 0.1 0.8 -0.4
I -0.1 -0.8 -0.7 -0.4 -0.9 0.1 -0.1 0 0 0.3 0.4 0.6 0 0.2 0.9 0.2 0.4 0.6 -0.2 -0.3
L -0.1 -0.1 -0.3 0.4 0.1 -0.1 -0.9 -0.5 0.1 -0.2 0.3 -0.4 0 0 0.2 0.2 -0.3 1.1 0 0.5
V 0 -1.1 -0.2 -0.8 0.3 -0.2 -0.2 -0.6 0.2 0.2 0.5 0.9 0.3 0.4 0.5 -0.1 0 0.4 -0.1 0.1
M -0.4 0.1 -0.1 0 -0.6 0.4 -0.2 0.5 0 0.2 -0.1 0 0.9 0.1 -0.2 -0.3 -0.3 -0.2 -0.1 0.2
W -0.2 -0.4 -0.4 -0.7 -0.4 -0.3 0.9 -0.9 0.3 0.5 0.5 -0.3 -0.2 1 -0.3 0.4 0.6 -0.6 -0.1 -0.3
Y -0.3 0.1 0.1 0.1 -0.3 0.2 -0.8 0.5 -0.3 -0.1 0.2 0 0.7 0.9 0.6 0.2 -0.2 -0.8 -0.3 -0.6
D 0.3 0.1 0.3 0.1 0.4 -0.2 0.7 0.1 -0.7 -0.2 0.1 0 -0.4 -0.1 -0.3 -0.3 -0.5 1 -0.2 -0.1
E 0.1 1.3 0.4 -0.1 0.3 -0.6 0.5 0.9 -0.9 -0.6 0 0.3 -0.1 0.1 -0.1 -0.4 0.2 -0.1 -0.3 -0.1
K -0.1 0.8 0.8 0.8 0.6 0.4 -0.5 0.3 -0.3 -0.6 -0.2 -0.7 0 0 -0.1 -0.1 -0.2 -0.5 -0.1 0.4
R -0.1 -0.2 0.4 0.8 0.5 0.2 -0.2 -0.3 0.5 -0.1 -1.2 -0.8 -0.4 -0.3 0.1 0.3 0.3 0.7 -0.3 0.5
H 0.2 0.1 0 0 0 -0.3 -0.6 0.2 1.1 0 0.1 -0.2 0.3 0.3 -0.8 -0.2 0 -0.6 0 0
N 0.3 0.6 0.6 0.4 0.5 0.3 -0.1 0.9 -0.3 -0.3 -0.7 -0.7 0.2 0 0 -0.4 -0.1 -0.6 0.2 0
Q 0.3 0.8 0.1 0.9 0.2 0.8 -0.6 0.1 0 0.2 -0.3 -0.3 0 -0.7 -0.3 -0.2 -0.6 -0.1 0.2 0.3
S 0.1 -0.3 0.3 -0.1 0.5 0.2 1.2 0.3 -0.1 -0.4 0.1 0.4 -0.2 -0.1 -0.1 -0.2 -0.4 0 -0.2 -0.1
T 0.5 -1 0.1 -0.3 0.2 -0.3 0.2 -0.7 0 -0.3 0.6 1 -0.2 -0.3 0.8 -0.3 -0.2 0.2 0.3 0.1
G 0.3 0 -0.2 -0.1 0.4 -0.4 0 -0.5 0.3 0 -0.7 -0.4 0.2 -0.3 -0.1 0.9 0.4 0.4 -0.2 0.2
P -0.4 0.1 0.4 0.6 0.3 0.4 -0.3 -0.2 -0.2 0.3 -0.4 -0.5 -0.7 -0.2 0.1 -0.5 0.4 0 -0.1 0.2
C -0.3 0.3 -0.5 -0.1 -0.4 -0.1 -0.4 0.9 -0.1 -0.5 0.4 0.7 0.1 -0.2 -0.2 0.5 0.3 -0.8 0.1 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0148 0.6 -0.2 0 -0.3 0.5 -0.4 -1.6 -0.4 -0.1 0.4 0.5 0.4 -0.2 0.4 0.5 0.9 0.8 0.4 -0.7 -0.8
0150 0.3 0 0.3 0.9 0.6 -0.4 -1.7 0.7 -0.7 0.1 -0.4 0.3 0.5 0.1 0.7 0.6 0.6 -0.2 -1.2 -0.4
Select residue pair below:
i_j Score Prob
0150_0162 2.057 1.00
0150_0159 1.807 1.00
0142_0150 1.060 0.95
0144_0150 0.860 0.82
0123_0150 0.822 0.78
0124_0150 0.753 0.69
0146_0150 0.689 0.59
Local Interactions:
i_j Score Prob
0148_0150 1.687 1.00
0150_0152 0.938 0.89
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.024 seconds.