May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [D:0146] and [C:0148]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.2 0.1 0.3 -0.2 0.3 0.5 0.5 0 0.1 0.2 0 -0.4 -0.2 0.1 0.1 -0.4 0.1 0.3 -0.3
F 0.6 -0.4 -0.5 -0.2 -0.6 -0.2 -0.2 -0.2 0.5 0.8 -0.3 -0.1 -0.2 0.3 0.5 -0.1 -0.6 0.7 0.1 0
I 0.1 -0.2 -0.1 -0.2 -0.3 0 -0.1 -0.2 -0.3 0.3 0.5 -0.1 0.2 -0.3 0.3 -0.1 0.1 0 -0.1 -0.2
L -0.1 0.1 -0.4 -0.1 -0.9 -0.1 -0.3 -0.3 -0.3 0 0.1 0.5 0.5 0 0.1 0.1 -0.5 0.3 0.7 0.3
V -0.1 0.1 -0.1 -0.1 0.3 0.2 -0.2 -0.5 -0.2 0.2 0.1 -0.2 0.4 0.3 -0.5 0.2 -0.3 0 0.4 -0.1
M -0.4 0.3 0 0.1 -0.2 -0.3 -0.1 -0.3 -0.2 0.4 -0.3 0 -0.1 -0.2 0.4 -0.1 0.2 0.2 -0.2 0.1
W -0.2 -0.1 -0.2 -0.2 -0.2 -0.1 -0.1 -0.2 0 -0.2 -0.4 -0.4 -0.2 2.2 -0.1 -0.3 0 -0.3 -0.1 -0.1
Y 0.1 -0.2 0.2 -0.5 -0.1 -0.2 -0.2 0 0.1 -0.1 0.1 -0.2 -0.3 0.6 0.4 0.1 0.1 -0.2 -0.3 -0.1
D 0.1 0.1 0 0.5 0.1 0.3 -0.7 -0.1 -0.6 -1.1 1 0.8 -0.4 0.1 -0.1 1.2 1.5 -0.5 -1.2 0.7
E 0.4 -0.1 0.3 0.5 1 -0.3 -0.8 0.2 0.2 -0.3 0 0.2 0.2 -0.4 -0.4 0.2 0 -0.1 0 0.5
K -0.4 -0.1 -0.9 -0.5 0.3 0.3 1.6 0.1 -0.2 0.1 -0.1 -0.2 0 0 0.1 0.1 0.2 0 -0.2 0.1
R 0.2 0.3 0 0.3 -0.3 -0.5 -0.1 0.3 -0.4 0.1 -0.3 0.3 0.1 -0.7 0.7 0 -0.3 0 0 0.1
H 0.4 0 0.4 0.4 1.3 0 -0.1 0.2 -0.2 -1 -0.2 0.3 -0.4 -0.1 -0.1 -0.4 0.3 0.1 -0.3 -0.4
N -0.4 0.1 0 -0.1 0 0.3 0 -0.1 -0.1 0.6 0.3 -0.6 0.1 0.1 -0.1 0.1 0.2 -0.3 0.5 -0.3
Q 0.2 0.1 0.3 -0.2 0.3 -0.4 -0.5 0.1 -0.5 -0.2 -0.1 0.5 0.1 -0.1 -0.2 -0.2 0 0 -0.5 0.3
S 0 -0.1 0.3 0.6 0 0.1 0.2 0 0.1 0.3 0.1 -0.2 0.4 -0.2 0.1 -0.2 -0.3 -0.1 0.3 -0.2
T -0.2 0.4 -0.1 -0.5 -0.3 0.9 0.2 -0.2 0.3 0.2 -0.2 0.3 0.4 -0.5 -0.1 -0.1 -0.4 -0.1 0.7 -0.3
G 0.1 -0.5 0.1 0.3 0.4 0.1 -0.4 0.5 0.5 0.2 -0.6 0.2 -0.7 -0.3 -0.2 0.2 0.3 -0.4 -0.1 0
P 0 1.4 0.3 -0.4 -0.1 -0.1 0.3 -0.2 -0.6 -0.3 0.4 -0.1 -0.2 -0.3 -0.3 -0.2 0.4 0.4 -0.1 0
C -0.4 -0.1 0.1 0.3 0.1 -0.2 0.1 0 0.2 0.2 -0.4 0 -0.2 0.1 0 -0.2 -0.2 0.4 -0.1 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0146 0.3 -0.6 -0.9 -0.3 -0.3 -0.8 -2.3 -0.6 1.6 0.8 0.1 0.1 -0.6 1.1 0.1 1.1 0.4 1.3 -0.4 -1.1
0148 0.6 -0.2 0 -0.3 0.5 -0.4 -1.6 -0.4 -0.1 0.4 0.5 0.4 -0.2 0.4 0.5 0.9 0.8 0.4 -0.7 -0.8
Select residue pair below:
i_j Score Prob
0144_0148 1.244 0.98
0148_0162 0.872 0.83
0148_0164 0.668 0.55
Local Interactions:
i_j Score Prob
0148_0150 1.687 1.00
0146_0148 1.664 1.00
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0259 seconds.