May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0142] and [W:0152]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.4 0.8 0.4 0 -0.1 0.2 0.8 0.9 -0.4 -0.4 0.2 -0.6 0 0.1 0.1 0 -0.3 -0.3 -0.3 0.1
F 0.6 -0.7 0 -0.1 0.8 0.3 -0.6 0.2 0.1 0 0.1 0.6 0.2 -0.1 -0.2 0.2 0.1 -0.1 -0.1 -0.7
I 0.4 0.3 0.1 0.8 0.5 0 -0.6 0.2 0 0 0.2 -0.1 -0.3 0 -0.5 -0.3 -0.1 0.8 -0.2 0.1
L 0.5 0.5 0.3 0.7 0.6 0 -0.5 0.3 -0.2 -0.2 -0.1 -0.3 0.4 -0.4 -0.4 -0.1 -0.6 0.1 -0.2 0
V 0.3 0.6 0.5 0.4 0.8 -0.1 -0.3 0.6 -0.3 0.3 -0.1 -0.2 -0.4 -0.6 -0.8 -0.2 -1.1 1.4 0 0.8
M 0.1 0.2 -0.1 0.5 0.3 0.2 -0.3 0.1 0 0 0.2 -0.3 -0.3 -0.1 -0.1 -0.1 0.1 -0.1 0 0
W -0.1 -0.4 -0.4 -0.4 -0.3 0.1 -0.3 0.7 0 0 0.2 -0.1 0.1 0 0 0.2 0.2 0 0.2 -0.2
Y -0.4 -0.5 0.3 0.3 0.8 0.3 -0.1 0 -0.1 -0.1 0.1 0.3 0.1 0.1 -0.1 0 -0.3 -0.2 -0.1 -0.1
D 0 -0.2 0.1 -0.2 -0.1 0 -0.2 0.2 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1
E 0.2 -0.2 0 -0.1 -0.2 -0.1 0.6 -0.3 0 0 0 -0.1 -0.1 0 0.2 0 0 0 0 -0.1
K 0 0.1 0 0 -0.2 0 0 0.1 0 0 0 -0.1 -0.1 0 0 0 0.1 0 0 -0.1
R -0.1 -0.4 -0.2 -0.1 -0.2 -0.1 0.8 -0.4 0 0 0 -0.1 -0.1 0.6 0 0.2 -0.1 0 0 -0.1
H -0.1 -0.2 -0.2 -0.1 0.5 -0.1 -0.7 -0.5 0 0 0 1.2 0.1 0 0 -0.1 0 0 0.2 -0.1
N -0.1 -0.4 0.9 -0.3 0.1 0.1 -0.6 0 0 0 0 0.1 -0.2 -0.1 0 -0.1 0.2 0 0 -0.1
Q 0 -0.2 -0.1 -0.2 0.1 0 0.1 -0.1 0.2 0 0 0 -0.1 0 0 0 0 0 0 -0.1
S -0.5 0.2 -0.4 -0.7 -1.4 0.3 1.3 0 0.1 -0.3 -0.3 0.9 1 -0.6 0.9 0.1 0.6 -0.8 -0.5 -0.1
T -0.5 0.2 -0.3 -0.1 -1 -0.7 1.2 0.5 -0.3 0.1 -0.6 0 0.9 0.7 0.4 0.2 0.6 -0.7 -0.4 0
G 0.2 0.9 -0.1 0.1 -0.3 -0.4 0.9 -0.1 -0.1 -0.1 -0.2 -0.6 -0.7 -0.2 -0.2 -0.3 0.8 -0.1 -0.1 0.1
P 0.2 -0.5 -0.1 0.6 -0.2 0.4 -0.2 -0.6 0.2 0 0 -0.1 -0.2 0 0 -0.1 -0.1 0 0.2 0
C -0.3 1 0.5 0.2 0.6 -0.4 0.2 -0.1 -0.1 -0.2 -0.3 -0.6 -0.2 0.1 -0.4 0.1 -0.1 -0.4 -0.1 0.7

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0142 0.7 0.5 1.4 1.2 1.7 0.3 -0.8 0.4 -0.9 -0.5 -0.6 -0.6 -0.4 -1 -0.8 -0.6 0.5 -0.4 -0.5 0.6
0152 -0.4 1.9 1.1 1.5 1 -0.2 2.8 2.2 -1.6 -1.4 -0.9 -0.1 0.5 -1 -1.7 -0.5 -0.3 -1 -1.6 0.5
Select residue pair below:
i_j Score Prob
0142_0152 2.211 1.00
0152_0159 0.768 0.71
0124_0152 0.752 0.69
0123_0152 0.617 0.47
Local Interactions:
i_j Score Prob
0150_0152 0.938 0.89
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0214 seconds.