OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [Q:0139] and [V:0141]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	-0.1	-0.1	0.1	0	-0.1	0.1	-0.5	-0.1	0.2	-0.1	0.3	0.1	0	-0.1	-0.4	-0.3	0.5	0.2	0.5
F	0.2	-0.1	0.1	0.5	0	0.6	-0.8	-0.4	-0.1	-0.1	-0.1	-0.1	0	-0.1	0.2	0.3	0.1	0.7	-0.1	-0.3
I	0.3	-0.1	-0.4	-0.8	-0.2	0	-0.8	0.2	-0.1	0.1	-0.1	0.1	0.1	-0.1	-0.1	0.9	1	0.8	-0.2	0.3
L	0.6	-0.1	-0.1	-0.3	-0.2	-0.2	-0.2	0.2	0	-0.3	-0.2	-0.2	0.2	0	-0.3	1.2	0.5	0	-0.3	0.5
V	0.4	0	-0.3	-0.4	0	0.2	-0.2	0.1	-0.2	-0.2	-0.1	-0.4	-0.1	-0.2	-0.1	0.9	0.6	-0.1	0.1	0.3
M	0.4	0.1	-0.4	-0.1	0.2	-0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0.3	0.2	0	0.4	0.1	-0.6	-0.1	0.6
W	0.3	-0.3	-0.4	0.3	0.1	-0.4	-0.3	-0.2	-0.1	-0.1	0	0.1	-0.2	0	0	1.1	0.1	0.1	-0.1	-0.8
Y	0.2	0.1	-0.1	0.3	-0.2	-0.2	-0.4	-0.6	-0.1	-0.1	-0.1	-0.4	-0.2	-0.1	-0.1	0.7	0.2	0.7	0.1	1.3
D	-0.6	0.2	0.2	-0.1	0	-0.2	0.1	0.6	0	0	0	0.2	0.2	0	0	-0.4	0	-0.2	0	-0.4
E	-0.5	0.4	0	0.4	0	0.8	1.9	-0.3	-0.1	-0.1	0.2	0	-0.2	-0.1	-0.1	-0.5	-0.3	-0.4	-0.1	-0.7
K	-0.1	0.3	0.3	-0.1	0.2	0	-0.6	0.7	-0.1	-0.1	-0.1	0.6	0.2	-0.1	-0.1	-0.6	0.2	-0.4	-0.1	0
R	0.3	-0.1	0.2	0.1	0.3	0.4	0.2	0.3	-0.1	0.2	-0.1	0	-0.4	-0.1	-0.1	-0.5	-0.2	0	-0.2	0.1
H	0.3	0.5	0.5	0.7	0.5	-0.4	-0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.3	0.1	-0.1	-0.5
N	-0.5	0	0.8	0.6	0.5	0	-0.4	0.4	-0.1	-0.1	0	-0.2	0.1	0	-0.1	-0.4	0.1	-0.4	-0.1	-0.5
Q	-0.1	0.8	0.2	0.2	0.1	-0.2	-0.2	0.4	-0.1	0.1	-0.1	-0.3	-0.3	-0.1	0.2	-0.3	0.2	-0.6	0.5	-0.1
S	-0.1	0.1	0.3	0.1	0.2	0.2	0.4	0.1	0.2	-0.1	0.2	0.3	-0.2	0.2	0.2	-0.7	-0.4	-0.2	-0.1	-0.1
T	0.3	-0.2	0.2	0	-0.1	-0.7	1.2	0.3	0.2	0.2	-0.1	-0.1	0	0.1	-0.1	-0.1	0	-0.2	-0.2	0.2
G	-0.8	0.2	0.4	0.5	0.2	0.3	0.2	-0.3	0	-0.1	0	0.1	-0.1	0	0	-0.6	-0.2	0.3	0	-0.3
P	0.5	-0.5	-0.1	-0.5	0	-0.2	-0.1	-0.4	0	0	0.5	0	0	0	0	-0.1	0	-0.1	0	-0.1
C	0.1	-0.1	-0.2	-0.3	-0.1	0.9	-0.1	0.3	0.1	-0.1	0	-0.1	0.2	0	0	-0.4	-0.2	-0.1	0.2	-0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0139	0.3	0.1	0.7	1.3	0.8	0	-0.8	0.2	-0.8	0	-0.2	0.5	-0.3	-0.3	0.3	0.6	0.7	-0.8	-1.5	-0.6
0141	0.1	1.2	2.1	2.3	2	1.1	-0.8	0.9	-1.1	-0.9	-1.1	-0.5	-0.5	-1.1	-1.2	-0.3	0.5	-0.8	-1	-0.8

Select residue pair below:

i_j	Score	Prob
0141_0175	2.251	1.00
0141_0183	2.050	1.00
0141_0151	1.962	1.00
0141_0173	1.703	1.00
0132_0141	0.719	0.64
0141_0149	0.608	0.45
0134_0141	0.565	0.38

Local Interactions:

i_j	Score	Prob
0139_0141	0.878	0.84

See all coupling residues
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