May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0134] and [Q:0139]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0.6 0.5 -0.1 0.2 0 0 -0.1 0.2 -0.5 0.3 0.2 0.1 -1 0 0.6 0.3 -0.4 0 -0.2
F 0.5 -0.6 0.1 -0.2 0.1 0.3 -0.5 -0.4 0.1 0.1 0.7 0.3 0 0 -0.1 -0.2 -0.1 0.1 0.3 -0.5
I -0.1 -0.9 0.2 -0.2 -0.2 0.4 -0.5 -0.4 0 0.8 0 0 -0.4 1.1 0.4 -0.3 -0.2 -0.3 0.1 0.5
L 0.2 -0.6 -0.1 0.1 -0.1 -0.7 0.4 -0.9 0.2 0.1 0.2 0.1 -0.1 -0.5 0.5 -0.2 -0.2 1.2 0 0.2
V 0.3 -0.3 -0.3 0.1 -0.2 0.5 -0.2 -0.5 -0.1 0.3 -0.1 -0.1 -0.3 1.1 -0.1 0.3 -0.2 0.4 -0.1 -0.2
M -0.1 -0.8 0.4 0.2 -0.2 -0.2 -0.4 -0.5 -0.1 -0.1 -0.8 0.3 -0.1 -0.3 0.2 0.5 0.2 0.7 -0.1 0
W 0 0.1 -0.3 0.6 -0.3 -0.1 -0.2 -0.3 -0.1 -0.3 0 0.4 0 -0.2 -0.1 -0.1 -0.1 0.4 -0.1 -0.2
Y 0.1 -0.3 0 0.1 0.2 -0.2 -0.8 0.2 -0.1 -0.4 -0.1 -0.5 -0.3 0.6 0.6 0.3 0.3 -0.2 0.4 0.2
D -0.3 0.4 0.5 0.1 0.4 -0.2 0.7 0.3 -0.8 -0.4 0.3 1.2 0.4 -0.3 -0.4 -0.1 -0.2 -0.2 -0.1 -0.2
E -0.5 -0.2 0.2 -0.4 -0.2 0 0.1 -0.5 0 -0.6 -0.1 1.4 -0.1 -0.4 0.3 -0.2 0 -0.2 -0.2 -0.1
K -0.1 -0.3 0.1 -0.5 0.3 0.1 0.1 0 -0.2 -0.3 -0.2 0.5 -0.5 -0.3 -0.2 -0.1 0.1 0.1 0.4 0.5
R 0.2 -0.4 -0.8 -1.2 0.1 -0.3 -0.9 0.5 0.5 0.8 -0.4 0.1 0.8 0.1 1.2 0.1 -0.2 0.7 -0.3 -0.5
H -0.7 0.6 0.8 0.4 0.8 0.1 0.5 0.6 0.2 -0.2 -0.7 -1 -0.3 -0.7 0 0.2 -0.3 -1.3 0.6 0.3
N -0.1 -0.1 0.5 0.6 0.1 0.4 0 -0.2 -0.6 0.3 0.3 -0.4 0.3 0 0.2 0.2 -0.1 -0.7 -0.6 0.3
Q 0.5 -0.2 -0.6 0.2 0 -0.1 0.5 -0.1 0 -0.3 0.1 -0.3 0.1 0.1 -0.2 -0.5 0.1 0.7 0.1 0.2
S -0.3 1 0.1 0.4 -0.1 0.4 0.7 0.9 -0.7 0.3 0.4 0.1 0.4 -0.3 0.1 -0.1 0.1 -1 -1.1 -0.1
T 0.6 0.3 -0.5 0.2 -0.3 0.4 -0.2 0.4 -0.2 -0.1 0.4 -0.1 0.8 0.3 0 -0.2 0.1 0.1 -0.6 -0.4
G 0.9 0.3 0 0 0.5 0 -0.5 0.5 0.4 -0.5 -0.4 -0.6 -0.5 -0.6 -0.9 0.3 0.8 0.1 1 0.3
P -0.5 1.3 -0.4 -0.3 -0.5 -0.6 -0.1 0.2 0.2 0.5 0.3 -0.2 0.1 0.7 -0.1 -0.1 0.2 -0.5 0.1 0.1
C -0.1 0 0 0.1 -0.2 -0.3 -0.4 0.5 -0.1 0.6 0.3 -0.3 -0.3 0.1 -0.6 0.5 0.2 0.1 -0.4 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0134 0.6 -0.1 0.1 0.9 0.5 -0.8 -1.2 -0.4 0.6 -0.9 -0.8 -0.3 0.2 0.6 -0.3 0.9 0.2 0.3 -0.1 0.1
0139 0.3 0.1 0.7 1.3 0.8 0 -0.8 0.2 -0.8 0 -0.2 0.5 -0.3 -0.3 0.3 0.6 0.7 -0.8 -1.5 -0.6
Select residue pair below:
i_j Score Prob
0134_0139 1.191 0.98
0139_0151 0.971 0.91
0139_0160 0.970 0.91
0136_0139 0.680 0.57
0139_0197 0.638 0.50
0139_0270 0.539 0.34
Local Interactions:
i_j Score Prob
0138_0139 1.392 0.99
0139_0141 0.878 0.84
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0203 seconds.