OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0133] and [A:0175]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.3	0.1	0.2	0.5	0.1	0.2	-0.3	0	-0.2	0	-0.1	0	0	0.1	0.1	0.1	-0.7	0.2	-0.6
F	0	0.4	0.1	0	0.1	-0.1	0.3	0	-0.3	-0.3	-0.1	0.1	-0.2	-0.2	0.4	0.1	0.1	-0.3	0.3	0.1
I	0.2	0.3	0.5	0	0.1	-0.1	-0.3	0.1	-0.2	-0.2	0.2	-0.1	-0.5	-0.2	-0.1	0.1	-0.2	0.5	-0.3	0.4
L	0	-0.1	0.2	0.2	0.4	-0.1	-0.2	0	0.3	-0.3	0.3	-0.4	-0.1	0.1	-0.8	0	0.3	0.3	0.1	0.1
V	0.3	0.5	0.3	0	0.2	-0.1	0	0.2	-0.2	-0.3	-0.3	-0.1	0.3	-0.5	0.3	0.2	0	-0.2	0	-0.2
M	-0.5	-0.3	0.1	0.4	0.3	0.4	0.3	0.3	0	0	-0.2	0.1	0.4	-0.1	0.2	-0.3	-0.3	-0.2	-0.1	-0.1
W	-0.1	0.1	0.1	-0.1	0.1	-0.1	1.5	0.5	-0.3	-0.1	-0.7	0.1	-0.7	0	-0.2	0.1	-0.1	1	-0.5	-0.5
Y	0.1	-0.1	0.1	-0.1	-0.1	0.2	0	0.3	-0.3	0.8	-0.2	0.1	-0.1	0	-0.2	-0.1	0.2	-0.3	-0.4	-0.1
D	-0.2	-0.7	-0.1	0.2	-0.3	0.3	-0.1	0	0	0	0	0	-0.1	0	0.1	-0.1	0.4	0	-0.1	0.3
E	-0.3	-0.2	-0.4	0.6	-0.6	-0.1	-0.3	0.2	-0.1	-0.1	-0.1	0.5	0.5	0.2	0.1	-0.1	-0.3	0.1	-0.2	0.2
K	0	-0.4	-0.3	0.2	0.3	-0.2	-0.1	-0.2	0	0	0.2	0.3	-0.1	0	0.3	0	0.1	-0.1	-0.1	-0.1
R	-0.3	-0.3	-0.3	0.2	-0.4	0.5	0.3	-0.2	0.2	0.2	0.3	0.1	-0.1	-0.1	0.1	0.2	-0.3	-0.1	0.3	-0.3
H	-0.2	0	0.4	0.3	-0.1	-0.2	0.2	0.1	-0.1	0.1	0.1	-0.1	-0.3	-0.1	-0.2	-0.3	-0.3	-0.2	0.5	0
N	0.6	-0.4	-0.3	-0.6	0.1	0.4	-0.5	-0.4	0	0	-0.1	-0.1	-0.1	0.2	0.3	0.5	0.3	0.1	-0.1	-0.1
Q	0.7	0.3	0.5	-0.6	-0.4	0.1	-0.5	-0.4	0.2	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	0.1	0	0.1	0	-0.1
S	0.2	0.4	0	-0.3	-0.1	0.4	-0.4	-0.2	0.3	0	0.6	-0.2	0.5	0.1	0	0	0	-0.2	-0.2	-0.2
T	0.1	0.4	-0.2	-0.1	0.3	-0.6	-0.6	-0.5	0.6	0.1	-0.3	0	0.2	0.1	-0.4	-0.1	0.8	0.1	0.6	0
G	-0.2	0.4	-0.2	0.4	-0.1	0.2	-0.4	0.1	0	-0.1	-0.1	-0.1	0.1	0	-0.1	0	-0.5	0	-0.1	0
P	0.2	-0.5	-0.5	-0.2	0.2	-0.5	0.7	0.1	-0.1	0.2	-0.1	0.1	0.2	-0.1	0.2	-0.3	-0.4	0	0.3	0.7
C	-0.2	0.3	0.2	0	-0.2	0.2	-0.3	0.7	0	-0.1	-0.2	-0.2	0.3	0.1	-0.3	-0.1	-0.1	-0.2	-0.1	0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0133	0.7	0.7	0.5	0.8	1.1	0.3	-0.3	0.5	-0.9	-0.8	-0.8	-0.3	-0.6	-0.4	-0.8	0.3	0.6	-0.6	0	0
0175	0.6	0.7	0.7	1	1	0.3	-0.4	0.1	-0.6	-0.7	-0.5	-0.4	-0.5	-0.7	-0.9	0.2	0.7	-0.7	0	-0.1

Select residue pair below:

i_j	Score	Prob
0089_0133	1.873	1.00
0090_0133	1.219	0.98
0133_0154	1.150	0.97
0133_0140	1.149	0.97
0087_0133	0.919	0.87
0096_0133	0.915	0.87
0133_0175	0.754	0.69
0105_0133	0.675	0.56
0095_0133	0.642	0.51
0036_0133	0.581	0.40

Local Interactions:

i_j	Score	Prob
0132_0133	0.825	0.78

See all coupling residues
Download raw data

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