OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [S:0132] and [V:0173]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-1	0.6	0.5	0.7	0	0.4	-0.5	0	0.3	0.2	-0.3	-0.7	-0.2	-0.1	0	-0.3	0	-0.1	0.3
F	0.7	0.2	-0.5	0	-0.3	0.1	0	-0.1	0	-0.1	0	0	0.2	0	-0.1	-0.2	0	0.4	0.1	-0.3
I	-0.3	-0.2	0.4	0.7	0.1	0.4	-0.1	0.1	0	-0.1	-0.1	-0.1	-0.1	0.1	0.2	-0.2	-0.4	-0.1	0.3	-0.6
L	-0.2	-0.1	0.2	0.5	-0.6	0.8	-0.1	0.1	-0.1	-0.1	0.1	-0.1	0.1	-0.1	-0.1	0.2	-0.2	-0.3	0	-0.1
V	0.2	-0.5	0.5	0.7	0.3	0.4	-0.1	0.3	0.1	0	-0.2	-0.1	0.2	0.1	0	-0.4	-0.7	-0.2	0.1	0
M	-0.4	0.1	0.2	0.1	-0.4	0.5	0	-0.1	0	0.2	0	0	0	0	0	-0.1	-0.2	0.2	-0.1	-0.2
W	-0.2	-0.2	-0.3	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0.1
Y	0	1.1	0.1	0.2	-0.3	0	0	-0.1	0	0	0	0	0.2	0	0	0.3	-0.4	-0.5	-0.1	-0.6
D	0.1	0.5	0.1	-0.2	0.7	-0.6	-0.1	-0.2	-0.2	0	-0.2	0.1	-0.4	0.1	0.2	-0.4	0.4	0.2	-0.2	0.1
E	0.4	0.6	-0.1	-0.1	0	0.6	-0.1	-0.2	-0.1	-0.2	-0.1	0.1	0	-0.1	-0.2	0.4	0	-0.5	-0.2	-0.1
K	-0.9	1.1	0.6	0.2	0	-0.1	-0.1	-0.2	-0.1	-0.2	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	0.6	-0.1	0
R	-0.1	0.1	0.1	0.2	0.2	0.1	-0.1	-0.5	0.1	0.1	-0.2	-0.1	0.1	-0.1	-0.2	0.1	-0.2	0.3	-0.1	0
H	0.3	0.5	-0.8	-0.6	0.1	-0.6	-0.1	0.1	-0.1	0.1	-0.1	0.2	-0.1	-0.1	-0.1	0.6	0.4	0.1	-0.2	0.5
N	0.5	0.1	-0.8	-1.2	0.1	-0.2	0	0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.8	1	0.2	-0.1	-0.1
Q	0.1	0.8	0.1	0.1	-0.1	0.1	-0.1	-0.4	0.1	-0.1	-0.1	-0.1	0.7	-0.1	-0.2	-0.6	-0.2	0	-0.2	0.4
S	0	-0.4	-0.1	-0.3	0.2	-0.6	0.1	-0.1	-0.2	-0.3	0	0.2	0.1	0.2	0.5	0.4	0.7	-0.1	0.3	0.2
T	0.1	-0.8	0.2	0.1	0.4	-0.2	-0.1	0	0.1	0.1	-0.1	0.1	-0.2	0	0.1	0.4	0.2	-0.3	0.6	0.1
G	0.9	-0.3	0.2	0.1	-0.1	-0.2	-0.1	-0.2	0.2	0.4	-0.1	-0.1	0.1	-0.1	-0.1	-0.5	-0.2	0.7	0.1	-0.6
P	-0.4	-0.2	-0.4	-0.4	-0.3	-0.2	0	0.2	0	0	0	0	0	0	0	0.7	0.8	-0.2	0	-0.3
C	0	-0.5	0.5	0.2	0.4	0.2	0.2	0.5	-0.1	-0.2	0.1	0.1	0	-0.1	-0.1	-0.5	-0.5	-0.3	-0.3	0.7

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0132	1	0	-0.1	0.2	0.6	-0.6	-1.9	-0.3	0.2	0.1	0.3	-0.1	0.2	-0.3	0.1	1.2	0.7	0.1	-1.6	0.7
0173	0.8	0.4	1.2	1.4	1.1	0.8	-0.8	-0.7	-0.7	-0.5	-0.8	-0.7	-0.6	-0.9	-0.6	0.9	0.3	-0.3	-0.2	0

Select residue pair below:

i_j	Score	Prob
0132_0174	2.235	1.00
0087_0132	1.931	1.00
0132_0173	1.100	0.96
0132_0141	0.719	0.64
0132_0175	0.681	0.57

Local Interactions:

i_j	Score	Prob
0130_0132	1.147	0.97
0132_0133	0.825	0.78

See all coupling residues
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