May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

mep50 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0129] and [K:0145]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0.9 -0.1 0.1 -0.1 -0.7 0.7 0.6 0.1 0.2 -0.1 -0.3 0.5 -0.4 -0.1 -0.3 -0.6 0.3 0 -0.2
F 0.1 0.7 -0.4 0.4 0.8 0 0.3 -0.3 -1 -0.6 1 -0.2 -0.4 0.4 0 0.2 -0.4 0.3 -0.5 -0.5
I -0.1 0.8 0.2 -0.2 0.1 0 0.3 -0.1 -0.4 0.1 0.7 -0.1 -0.4 0.2 -0.3 0.1 0.3 -0.2 -0.3 -0.3
L 0.4 -0.6 0.2 0.5 0.3 0.3 -0.7 0 -0.5 0.2 0.5 -0.1 0 -0.2 -0.2 0.1 0.5 -0.2 0.3 0
V -0.1 0.2 0.7 0.8 0.6 1.7 0.3 -0.5 -0.8 -0.2 0.1 -0.5 0 0.4 -0.3 -0.1 0.1 -0.7 -0.9 -0.3
M 0.2 -0.1 -0.1 0.3 0.3 -0.4 0 -0.5 -0.2 -0.3 0.5 0.2 0.2 0.1 -0.1 -0.2 -0.3 -0.3 0 1.3
W 1.1 -0.3 0.2 -1.5 0.1 -0.1 -1 0.1 1.3 0.4 -0.9 -1 1.2 0.2 0.3 0.2 -0.2 0 0.7 -0.6
Y 0.3 -0.3 -0.8 -0.4 0.3 0.7 -0.8 0.8 -0.6 -0.2 0 0 -0.2 -0.7 -0.6 0.2 1 0.7 0 0.6
D -0.1 -0.8 0 0 -0.4 -0.5 0.6 0 0.2 -0.1 -0.4 0.2 -0.2 -0.6 -0.2 0 0.2 0 0.1 -0.1
E 0.3 -0.6 -0.6 -0.8 0 -0.7 -0.5 -0.5 -0.3 1.1 -0.3 0.5 0.2 0.5 0.3 0.4 0.5 0.3 -0.3 -0.4
K -0.2 0.3 0.5 0 0.1 -0.3 0.3 -0.6 0.2 0.2 -0.3 0.8 -0.6 -0.2 -0.1 0.1 -0.1 -0.4 1 -0.1
R -0.1 0.2 -0.6 -0.3 -0.1 -0.3 0.2 0.3 1.8 0.1 -0.6 0.2 -0.6 0.3 -0.2 0 -0.3 0.1 0.1 -0.4
H 0.1 0.4 0 -0.1 -0.5 -0.6 -1.1 -0.2 0.3 0.1 0.1 0.1 0.3 -0.4 0.5 0.2 -0.4 0 0.2 -0.2
N 0.3 -0.6 -0.3 -0.8 -0.7 0 -0.5 -0.2 1.6 0.2 0.2 0 -0.3 0.5 1 0.4 -0.1 0.6 -0.4 -0.2
Q 0.3 0.2 0.6 0.5 0.2 -0.3 -0.4 -0.6 0 -0.3 -0.8 -0.4 0.1 0.2 0 0.6 0.4 -0.2 -0.2 0.1
S -0.4 0.4 -0.2 0.6 -0.1 -0.1 1.2 0.4 0 0.1 0.1 0 0.4 -0.5 -0.6 -0.4 -0.1 0.1 0.1 0.2
T 0 -0.4 0.2 1.1 0.4 0.5 -0.2 -0.4 -0.1 0.7 0.5 0 -0.3 0 0.1 0.1 0.1 -0.4 -0.4 0
G -0.2 -0.4 0.2 -0.5 -0.5 0.7 -0.6 0.7 -0.1 -0.5 -0.2 0.7 -0.2 -0.2 1.8 -0.3 -0.2 0.2 0.4 -0.3
P -0.5 -0.1 -0.2 0.6 -0.2 0 -0.1 0.3 -0.4 -0.1 0.3 0.5 -0.3 -0.3 -0.5 -0.2 0 0.9 0.1 -0.1
C -0.7 0.3 -0.1 0.1 -0.3 0.1 1.9 0.6 -0.7 -0.4 -0.1 -0.9 0.1 1.3 -0.4 -0.1 -0.5 -0.3 -0.2 0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0129 -0.1 -0.2 -0.1 0.7 0.1 -0.2 -0.2 0.2 -0.7 0 0.2 0.4 -0.2 0.8 -0.1 1.1 1.4 -0.3 -1.3 -0.6
0145 0.5 -0.2 -0.9 0 -0.3 -0.8 -0.4 0 0.9 0.6 0.3 0.6 -0.3 0.5 -0.2 1.1 0.1 0.7 -0.9 -1.6
Select residue pair below:
i_j Score Prob
0129_0145 1.876 1.00
0084_0129 0.720 0.64
0032_0129 0.695 0.60
Local Interactions:
i_j Score Prob
0129_0130 0.625 0.48
0127_0129 0.578 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...

Page generated in 0.0143 seconds.