OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0128] and [T:0130]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-0.5	0.7	-0.4	-0.4	-0.3	0.6	-0.3	0	0.5	0.1	0.1	0.5	-0.1	-0.4	0.4	0.3	-0.2	-0.6	0.2
F	-0.1	0	-0.2	-0.2	0.4	0.2	0	-0.1	-0.6	-0.7	0.2	-0.1	-0.2	0.2	1	0.8	0	-0.1	-0.4	0.4
I	0.4	-0.3	-0.9	-0.5	-0.5	-0.5	-0.1	-0.1	1	0.1	0.3	0.2	0.4	0	0.7	0.9	0.3	0.5	-1	0.3
L	0.2	0.2	-0.4	0	-0.7	0.1	0.4	-0.1	0.5	-0.8	0	0.1	0.3	-0.1	-0.1	0.5	0.2	0.7	-0.6	0.4
V	0.6	-0.2	-1.1	-0.8	-0.4	0.1	-0.2	-0.5	0.9	-0.2	0.2	0.3	0.4	0	0.5	0.8	0.5	0.8	-0.5	0.4
M	-0.6	0	0.4	-0.1	0.3	-0.2	0.4	0.2	0.1	-0.4	0.1	0.4	-0.1	-0.3	-0.1	0	0.6	-0.4	-0.6	0.7
W	0.1	0.1	-0.2	0.1	-0.1	-0.1	0.1	-0.1	-0.4	-0.2	-0.2	0.1	0	0	-0.2	-0.1	-0.2	-0.1	-0.1	0.5
Y	0.7	0.5	-0.1	0	-0.1	0.1	0.4	0.2	-0.1	-0.2	-0.5	-0.5	0.1	0.4	0	0.6	-0.3	-0.5	-0.1	-0.6
D	-0.5	-0.1	0.3	0.7	-0.1	0.2	-0.2	-0.1	0	0	0	0.4	-0.2	0	-0.3	-0.7	-0.2	0.2	0.3	-0.1
E	-0.6	0.1	0.3	-0.2	-0.3	-0.1	0.3	0.1	-0.4	-0.2	0.5	-0.1	-0.1	0.3	0.2	-0.3	-0.4	-0.3	1	-0.4
K	0	0.2	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.3	0.3	0	-0.1	0.1	-0.2	-0.4	-0.1	-0.3	0.5	-0.5
R	-0.9	0.3	0.2	0.3	-0.1	-0.1	-0.3	0.5	0.1	0.8	-0.1	-0.1	-0.3	-0.2	0.4	-0.7	-0.3	0	0.7	-0.3
H	0.3	-0.1	0.1	0.6	-0.1	0.1	0	-0.1	-0.3	-0.1	0	-0.3	-0.1	-0.1	0.1	-0.1	-0.3	-0.3	0.1	0.1
N	-0.1	-0.1	0.3	0.4	0	0.1	-0.3	0.2	-0.3	-0.3	-0.1	0.1	0.1	1.1	-0.1	-0.6	0.1	-0.7	0.1	-0.3
Q	-0.6	0.4	0.3	0	-0.1	-0.1	0.3	0.1	0	0.6	-0.3	0.1	0.4	0.1	-0.1	-1.1	-0.5	-0.5	0.2	0.4
S	0.4	0	0.1	-0.1	0.2	0	-0.3	0	-0.3	-0.1	0.2	-0.3	0.5	-0.3	-0.7	-0.1	0.5	0.3	0.8	-0.2
T	0.5	-0.3	0.1	0.2	0.6	-0.3	-0.4	0.2	0.7	-0.3	0.1	-0.6	-0.1	-0.1	-0.4	0.1	0.5	0.1	0	-0.2
G	0	-0.4	0.1	0	0.2	-0.2	-0.5	-0.3	1	0.2	-0.3	0.3	-0.7	0.1	-0.1	0	0	-0.3	0.4	0.4
P	-0.1	0.1	0.5	0.6	0.4	-0.1	-0.7	0.3	-0.9	0	0.2	0.6	0.1	-0.9	0.2	0	-0.2	0.7	-0.4	0.1
C	0.9	0.4	-0.3	0.1	0.2	0.8	-0.4	0.2	-0.2	1	0	-0.6	-0.6	0.2	-0.2	0.4	0	-0.3	-0.3	-0.9

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0128	0.7	0.5	1	1	1.1	0.1	-1	-0.2	-0.7	-0.7	-0.8	-0.1	-1	-0.3	-0.6	0.4	0.5	-0.3	0.1	-0.3
0130	0.7	0	-0.5	0.5	-0.2	-0.8	-1	0	-0.1	-0.4	0.1	0.1	0.1	0.8	0.1	0.9	0.2	0.6	0.1	-0.2

Select residue pair below:

i_j	Score	Prob
0130_0143	2.959	1.00
0130_0173	1.055	0.95
0085_0130	0.928	0.88
0130_0172	0.816	0.77

Local Interactions:

i_j	Score	Prob
0130_0132	1.147	0.97
0130_0131	0.646	0.52
0129_0130	0.625	0.48
0128_0130	0.548	0.35

See all coupling residues
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