May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0127] and [S:0129]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 -0.1 0.2 -0.4 0 0.7 0 -0.2 -0.4 0.1 0.2 0.5 0.1 0.3 0.4 0.2 0.2 0 -0.2
F -0.1 0.1 -0.6 -0.4 0.1 -0.6 -1.2 0.2 -0.1 -0.8 -0.4 0.5 0.5 0.8 1.3 -0.2 0 0.1 0.7 -0.2
I -0.4 0 -0.1 -0.1 -0.6 -0.1 -0.2 0.3 -0.2 -0.5 0.7 0.1 0 0.7 0 0.2 0.1 -0.7 0.1 -0.6
L -0.4 -0.4 -0.4 0.2 0 0.2 -0.2 -0.4 -0.1 -0.1 -0.1 0.3 0.6 0.3 0.2 0.4 0.4 -0.2 0.1 -0.3
V 0.2 0 0.6 0 0 -0.1 0.5 0.1 -0.4 -0.9 0.3 0.1 -0.1 0.3 0 0.1 0.2 0.5 -0.2 -0.9
M -0.6 -0.5 -0.1 0.1 -0.5 1 -0.8 0.2 0.2 0.4 -0.2 0 0.3 0.3 -0.1 -0.3 0.4 0.2 0.1 -0.6
W -0.4 -0.5 -0.6 -0.4 -0.8 -0.1 0.3 -0.7 1.5 1.1 0.2 0.4 -0.3 -0.2 -0.2 -0.3 0.1 0.8 0 -0.1
Y -0.3 0.6 -0.1 0 0.6 0.1 -1.1 0.7 0.1 -0.8 0.5 0.6 -0.4 0 0.1 0.7 0.1 -0.5 -0.4 -0.8
D 0.1 -0.5 0.7 0.8 0.5 -0.2 -0.4 0.7 0.2 1.1 -0.2 -1.2 -0.5 0.6 0.4 -0.3 -0.3 -0.7 0 0.1
E -0.1 0.8 0.8 0.1 0.5 0.1 1.2 0.6 -1.1 0.9 0.1 -0.7 0 -0.2 -0.7 0 -0.1 -1.1 -0.2 0.5
K -0.1 0.2 0.1 0.1 0.4 0.6 -0.3 0.4 -0.2 0.6 -0.1 0.1 -0.5 -0.1 -0.3 -0.1 0.1 -0.7 -0.5 -0.2
R 0.7 -0.1 0.1 -0.1 0 -0.5 0.9 -0.9 -0.2 0.2 -0.8 -0.8 -0.4 -0.2 -0.1 -0.1 -0.5 1.5 0.8 -0.2
H -0.2 -0.1 0.3 0 0.8 0.8 0.6 0.4 -0.1 -0.5 -0.7 -0.5 -0.7 -0.5 -0.4 0.2 0.2 -0.1 -0.2 -0.2
N 0.4 -0.3 -0.1 0.3 -0.1 -0.1 -0.4 -0.4 -0.3 -0.4 0.1 -0.4 -0.7 -0.4 0.3 0.3 0.2 0.1 0.2 1.8
Q 0.4 -0.1 0.4 0.3 -0.5 0.1 0.3 -0.5 -0.1 -0.3 -0.5 -0.1 0.5 0.6 -0.1 -0.3 -0.1 -0.1 0 0.7
S 0 0.1 -0.2 0.1 -0.3 -0.4 0.2 -0.3 0.3 0.9 0.1 0.2 0 -0.3 0.4 0.1 0.1 0.5 0.1 -0.1
T 0.4 -0.3 -1 -0.2 -0.5 -0.2 -0.1 0.3 -0.1 0.3 0.2 0.7 0.5 -0.1 0 0.3 0.2 0.3 -0.8 0.7
G 0 0.3 0.1 0.1 0.1 -0.2 0.4 0.1 0.6 0.1 -0.3 0 -0.4 -0.1 -0.3 -0.3 -0.1 -0.1 -0.1 0.8
P 0.2 0.8 0.4 -0.1 0.2 -0.1 0.9 0.4 -0.3 -0.7 0.2 0.7 0.6 -0.2 -0.3 0.2 0.1 -0.8 -0.9 -0.3
C -0.2 1 -0.3 -0.1 0.3 -0.2 -0.4 -0.2 -0.2 -0.6 -0.1 0.2 0.1 0.2 -0.5 0.4 0.3 -0.1 0.1 -0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0127 1.1 -0.7 -0.5 -0.5 -0.5 -1.2 -0.1 -0.9 0.6 1.1 0.1 0.6 -0.9 -0.2 0 1.2 0.4 1.1 1.2 -1.1
0129 -0.1 -0.2 -0.1 0.7 0.1 -0.2 -0.2 0.2 -0.7 0 0.2 0.4 -0.2 0.8 -0.1 1.1 1.4 -0.3 -1.3 -0.6
Select residue pair below:
i_j Score Prob
0127_0145 0.779 0.73
0099_0127 0.572 0.39
Local Interactions:
i_j Score Prob
0126_0127 1.262 0.99
0127_0129 0.578 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0172 seconds.