OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [H:0124] and [K:0150]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.5	-0.2	-0.2	0	-0.3	-0.7	0	-0.1	-0.3	0	0.1	0.5	0.6	0.6	0.2	0.2	-0.1	-0.2	0.1	0.2
F	0.2	-0.7	-0.6	-0.7	-0.4	0	-1.1	0	-0.1	-0.2	1.2	-0.1	-0.3	-0.3	0.8	0.4	-0.1	1	0	1.2
I	0.6	-0.1	0	0.1	-0.4	-0.1	0	-0.2	-0.6	0.2	0	0.1	-0.3	-0.5	-0.5	0.4	0.2	0.8	-0.1	0
L	0.3	-0.1	-0.2	-0.3	0	0	-0.2	0.1	0	-0.1	-0.1	0	-0.2	-0.1	-0.2	0.5	0.3	0.3	0	0.2
V	0.6	-0.4	-0.5	0.3	-0.3	-0.2	-0.3	0	0.1	-0.2	0.3	-0.4	0.3	0.2	-0.1	0	-0.1	0	0.3	-0.1
M	0.2	0.3	-0.3	0.1	-0.3	-0.3	-0.3	0.3	-0.4	-0.3	0.8	0.1	0	-0.7	-0.2	0.1	0.3	0	-0.1	0.3
W	-0.2	0	0.2	-0.3	0.3	-0.1	-0.1	0	0.5	-0.2	-0.1	-0.2	-0.3	-0.2	0.2	-0.3	0.2	0.1	0	-0.2
Y	-0.1	0	0.2	-0.3	-0.3	0	-0.2	-0.1	0.7	-0.1	0.1	0.1	-0.2	0.1	0.2	-0.2	0.1	-0.2	0.1	-0.1
D	-0.3	-0.3	0.2	-0.2	-0.1	0.2	0	-0.2	1	0.2	0.1	0.5	0	0.3	0.1	-0.3	-0.2	-0.4	-0.1	-0.8
E	-0.1	0.5	0	0.3	-0.1	0.5	-0.6	0.2	-0.6	0	0.4	0.5	0.3	0.1	0.3	0	-0.3	-0.5	-0.2	-0.1
K	-0.6	0.4	0.2	0.5	0.5	0.1	-0.6	0.7	0	-0.2	-0.7	-1.1	0.5	0.2	0.2	-0.3	0.2	0	0.1	-0.2
R	-0.1	-0.4	0.2	0.8	0.6	0.5	0.2	-0.1	0.8	0.7	-0.3	-0.4	-0.1	-0.2	-0.2	-0.7	0.5	-1	-0.1	-0.3
H	-0.4	0.6	0.5	0.2	0.5	0.3	-0.3	0.1	0.4	0.5	0.1	-0.3	-0.6	0.1	-0.8	-0.2	-0.6	0.6	-0.3	-0.1
N	0.1	-0.1	0.2	-0.1	0.8	-0.1	-0.8	-0.1	-0.2	-0.1	0.2	0	-0.5	0.5	0.6	-0.1	0.1	-0.4	-0.2	0.2
Q	1	-0.1	0.2	0.4	-0.1	-0.1	0.1	-0.4	-0.2	0.4	-0.9	0.1	0.1	0	-0.1	0.2	-0.3	0	0.1	0.3
S	-0.4	-0.1	0.2	0.2	0.2	-0.1	0.2	0.2	0.1	0.1	-0.2	0.1	-0.2	0	0	0.3	0.5	-0.4	-0.1	0.2
T	0.1	-0.3	-0.1	0.1	0.2	-0.2	-0.5	-0.1	-0.2	-0.3	0.1	0.1	0.3	0.7	0	-0.1	0	0.5	0.3	-0.5
G	0.4	0.2	0.3	-0.5	0	0.1	0.5	0.1	-0.4	-0.4	-0.5	0.7	0.2	0.4	0.3	0.2	0.3	-1	-0.2	-0.3
P	0	0.3	-0.4	0.1	0.1	0.2	1.5	0.1	-0.6	-0.1	-1.2	0	-0.1	-0.3	-0.5	0.1	-0.1	0.5	-0.2	0.1
C	-0.6	0.1	0	0.2	-0.7	-0.1	0.3	0.1	-0.4	-0.2	0.4	-0.5	0.2	-0.1	0.5	0.4	-0.1	-0.2	0.2	0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0124	0.3	0	-0.1	0.3	-0.1	-0.8	-1.3	-0.3	0.3	0.2	0.1	0.3	0.1	0.4	-0.1	0.7	0.4	0.3	0.3	-0.8
0150	0.3	0	0.3	0.9	0.6	-0.4	-1.7	0.7	-0.7	0.1	-0.4	0.3	0.5	0.1	0.7	0.6	0.6	-0.2	-1.2	-0.4

Select residue pair below:

i_j	Score	Prob
0124_0142	2.853	1.00
0124_0144	1.219	0.98
0124_0128	1.001	0.92
0124_0146	0.928	0.88
0124_0150	0.753	0.69
0124_0152	0.752	0.69

Local Interactions:

i_j	Score	Prob
0123_0124	1.143	0.97
0124_0125	0.885	0.85

See all coupling residues
Download raw data

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