OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [N:0111] and [E:0112]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0.1	0.1	0.1	0.8	-0.3	-0.5	0.3	0.1	0.2	-0.2	-0.2	-0.2	0.1	-0.1	0.1	-0.1	0.2	-0.1	-0.3
F	0.2	-0.2	-0.6	-0.5	0.4	-0.3	-0.3	0	0.3	0.6	1.1	0.3	0.1	-0.4	0.3	0.3	0.1	-0.8	-0.4	-0.1
I	0.1	-0.2	0.7	0.9	0.1	0.7	0.2	-0.2	-0.7	-0.3	0.5	-0.5	0	0.1	-0.3	-0.1	-0.2	-0.4	-0.4	-0.2
L	0.3	-0.4	0.1	0.1	-0.1	-0.2	0	-0.7	0.2	0.3	-0.2	0.3	0.5	-0.3	0.1	0.1	-0.1	0.1	-0.3	0
V	-0.1	-0.3	0.3	0.1	-0.4	0.5	0.2	0.2	0.1	-0.2	-0.1	0.1	-0.2	-0.2	0	0.1	-0.1	-0.1	0.7	-0.1
M	-0.5	-0.7	-0.5	-0.4	-0.2	0.4	-0.2	0.1	0.6	0.1	0.3	0.3	0.3	-0.2	-0.2	-0.2	-0.1	-0.1	0	0.2
W	0.3	-0.5	0.1	-0.3	-0.1	-0.3	-0.1	-0.3	-0.2	0.9	0.3	0	-0.2	0.1	-0.1	0.4	0.6	-1	0.2	-0.1
Y	-0.6	0.2	0.1	0	0.1	0.2	-0.2	-0.3	-0.1	0.1	0.7	0.4	-0.4	-0.1	-0.1	-0.2	-0.5	0.5	0	-0.3
D	0.5	-0.1	0	-0.1	-0.3	-0.1	0.2	0.7	0.2	-0.2	-0.3	-0.4	-0.3	0.2	-0.2	0.1	-0.1	0.6	0.2	-0.1
E	-0.2	-0.2	-0.4	-0.2	0.1	0.3	0.2	0.4	-0.2	-0.3	-0.2	-0.5	-0.1	0	-0.2	0.4	0.4	0.3	0.3	0.3
K	-0.4	-0.3	0.1	0.2	0.1	0.5	-0.3	-0.2	0.1	0.1	0.3	-0.1	-0.3	0.1	0.2	0	0	0.1	-0.1	-0.6
R	0.3	-0.1	0	0.1	-0.1	-0.1	-0.1	-0.3	0.1	0.1	0.1	0.6	-0.6	0.2	0.1	-0.2	0.2	-0.1	-0.2	0.4
H	-0.1	0	-0.3	-0.4	-0.1	0	0	0.3	-0.5	0.2	-0.3	0.2	0.2	0.1	0.3	0.2	-0.2	0.4	0.3	0
N	-0.3	0.8	-0.1	-0.2	-0.1	-0.4	0.5	-0.3	-0.3	-0.1	0.5	0.4	-0.9	0.5	0.8	-0.3	0	-0.3	0.1	0.2
Q	-0.2	0	0.4	0	-0.1	-0.2	-0.2	0.2	0.2	-0.2	0.2	0	0.2	-0.3	0.1	0	0.1	0.1	0	-0.3
S	-0.2	0.9	0.3	0	-0.1	-0.4	-0.4	0	0.2	-0.1	-0.3	-0.2	0.3	0	-0.2	0.1	0.1	0.2	0.1	0
T	0	0.6	0.1	0.2	0.3	-0.1	0	-0.2	-0.1	-0.3	-0.7	-0.7	-0.2	0	-0.1	0.2	0.1	0.7	0.8	-0.6
G	0.2	0.6	0.4	0.3	0.5	0	-0.2	0.2	-0.2	0	0.1	0.3	0.4	0.2	0.1	-0.3	-0.1	-0.5	-1.1	1.1
P	0.8	-0.5	-0.2	-0.1	-0.5	-0.4	0.1	0	0.6	0	-1	-0.1	0.2	0.3	-0.5	0.2	0.3	0.4	0.4	-0.3
C	0.1	0.1	-0.5	0	-0.2	0	-0.1	-0.3	-0.3	-0.1	0.4	0.3	0.7	0.4	0.4	0	-0.2	-0.3	-0.2	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0111	0.5	-0.8	-0.3	0.3	-0.1	-0.8	-1.4	-1.2	0.6	0.5	0.2	0.1	-0.4	0.7	0.2	0.7	0.2	1.7	0.2	-1
0112	0.5	-0.7	-0.7	-0.1	-0.2	-1.1	-1.8	-1.5	0.8	1	1.3	0.8	-0.8	0.5	0.5	1	0.8	0.5	-0.1	-1.4

Select residue pair below:

i_j	Score	Prob
0111_0114	0.661	0.54
0108_0111	0.568	0.38

Local Interactions:

i_j	Score	Prob
0110_0111	1.332	0.99
0111_0112	0.560	0.37

See all coupling residues
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