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Coupling matrix for [A:0102] and [E:0104]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 0 -0.3 0.2 0 -0.4 -0.5 0.2 0.6 -0.2 0.2 0.3 0 -0.2 0.2 0.1 -0.2 0.5 -0.3
F 0 0.1 -0.2 -0.8 -0.5 0.1 -0.6 0.9 -0.2 -0.2 0.3 0.2 0.3 0.2 0.4 -0.1 0.2 0.1 -0.1 -0.3
I -0.2 -0.7 -0.8 0 -0.8 0.5 -0.3 0 0.4 0.4 0 0.5 -0.1 0.3 0.5 0.4 0.1 0 -0.1 -0.3
L -0.5 -0.6 0 -0.2 -0.1 0.9 -0.7 -0.5 -0.1 0.1 -0.1 0 0.1 0.8 0.4 0.2 0.2 0.1 -0.1 0.5
V 0 -0.4 -0.1 0 -0.9 0.6 -0.3 -0.4 -0.1 0.3 0 0.5 -0.1 0.4 0.2 0.1 0.1 0.3 0.1 0
M -0.4 -0.5 0.1 -0.4 -0.1 -0.2 -0.4 0.4 0.3 -0.7 0.1 -0.3 0.2 0.2 0.7 0.3 0.4 0.2 -0.1 -0.1
W -0.2 -0.1 -0.3 -0.1 0.1 -0.2 -0.2 0.5 0.3 -0.2 -0.5 0.1 0.3 -0.4 0 -0.1 0 0.3 0 -0.3
Y -0.4 0.7 -0.4 -0.7 -0.3 0.1 -0.8 0.6 -0.3 0.3 0.3 -0.4 0.6 0.6 0.5 -0.2 0.1 0 0.3 -0.6
D -0.3 0.5 0.3 0.6 0 -0.2 0.9 0.6 -0.2 0.4 -0.1 0 -0.5 -0.7 -0.3 -0.1 0 -0.7 -0.1 -0.1
E -0.1 0.6 0.6 0.3 0.4 -0.1 0.9 -0.1 -0.2 0.1 0 0.2 -0.4 -0.8 0.2 -0.2 -0.3 -0.3 -0.2 0
K -0.2 0.4 0.7 0.7 0.5 0.1 -1.1 0.6 -0.1 -0.2 0 -0.3 0 0.2 -0.4 0.1 -0.4 0 -0.3 0.6
R 0.5 0.4 0.3 0.5 1 -0.2 -0.4 -0.1 0 -0.3 -1.4 -0.6 -0.6 -0.3 -0.7 0 0.7 0.9 -0.3 0.5
H 0.2 1.3 -0.2 0.6 -0.2 -0.3 -0.6 0.1 -0.3 -0.1 0.5 -0.1 -0.1 0.2 -0.3 0.1 -0.5 0 -0.1 -0.2
N 0.3 0.5 0.4 0.7 0.1 -0.2 0.6 0.7 -0.2 0.4 -0.5 -0.6 -0.5 0.1 -0.2 -0.5 -0.2 -0.3 0.1 0
Q 0.8 0.2 0.3 1 0.9 0 -0.3 -0.8 -0.2 -0.4 0.6 0.2 -0.6 -0.4 -0.5 -0.3 -0.4 0.2 -0.2 0.3
S 0.4 -0.1 0.2 -0.1 0.1 -0.2 1.3 -0.3 0.4 -0.3 0.1 0.2 0.1 -0.2 0 0.4 0 -0.2 -0.4 0.1
T 0.4 -0.9 0.1 -0.5 0 -0.4 0.7 -0.4 0.1 -0.1 0.4 0.7 -0.4 0 0.4 0.4 0 0.4 0.2 0.1
G 0.7 0.1 0.1 -0.3 0 -0.2 0.6 -0.8 -0.5 0.1 0.1 0.1 -0.2 0.2 -0.4 0.3 0 0.2 -0.1 0.4
P -0.3 -0.6 -0.4 -0.2 -0.3 -0.3 -0.1 -0.7 -0.2 -0.5 0.3 0.4 2.3 0.2 0.6 -0.5 0.5 -0.4 0 -0.2
C 0 0 0 -0.3 -0.1 0 -0.3 1 0.3 0 0.1 -0.3 -0.1 -0.2 -0.5 0.2 -0.1 -0.3 -0.1 0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0102 0.3 -0.7 -0.2 0.1 0.3 -0.7 -1.5 -0.2 0.1 0.7 0.7 0.5 0.3 0.4 0.5 0.8 0.7 0.2 -1 -0.7
0104 0.4 0 0 0.8 0.5 -0.5 -1.7 0.4 -0.5 0.1 0.2 1 0.7 0 0.7 0.4 0.4 0.1 -1.6 -0.1
Select residue pair below:
i_j Score Prob
0098_0102 1.247 0.99
0102_0122 0.601 0.44
Local Interactions:
i_j Score Prob
0100_0102 1.870 1.00
0102_0104 1.346 0.99
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
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