OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [A:0097] and [G:0101]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0.7	-0.7	-0.3	-0.7	-0.3	0.5	0.2	-0.1	-0.2	0	0.1	0.5	0.1	-0.1	0.1	0	0.5	0.3	-0.1
F	-0.4	0	0.4	1.2	0.1	0	-0.1	0.2	-0.2	-0.6	0.8	1.4	-0.2	0.1	-0.1	-0.4	-0.6	-0.2	-0.5	-0.1
I	0	-0.6	0.3	0	0.4	-0.2	0	-0.2	-0.4	-0.1	0.1	-0.3	-0.3	0.1	-0.1	0.5	1.2	-0.1	0.5	-0.4
L	0	0.2	0.1	-0.1	-0.1	1.1	0	0.3	0.5	0	-0.4	0.7	-0.1	-0.4	-0.5	-0.1	0.1	-0.2	-0.6	0.1
V	0.4	-0.2	0.2	-0.3	0.5	-0.5	-0.5	-0.5	0.4	0.3	0.4	0	-0.2	-0.2	0.3	0.2	0.2	0.6	0.2	0
M	0.4	-0.1	-0.1	0.2	-0.1	0.3	0	-0.1	-0.2	0	-0.4	0.4	-0.2	0.1	-0.2	0.4	-0.2	-0.2	-0.2	-0.1
W	-0.3	-0.1	-0.1	0.7	-0.1	-0.1	0	-0.1	0.6	0.4	1	0.1	-0.3	-0.4	-0.1	-0.2	-0.3	-0.5	0.1	-0.2
Y	0.7	-0.2	-0.1	0.3	-0.2	-0.1	-0.1	-0.2	-0.1	-0.3	0.4	0.2	-0.5	-0.4	-0.2	1	0.4	-0.6	-0.1	-0.3
D	0	-0.1	0.2	-0.2	0.1	-0.1	0	-0.1	0	-0.2	-0.1	-0.2	0.9	-0.2	-0.2	-0.3	-0.2	-0.4	0.1	-0.1
E	0	-0.1	-0.1	0	-0.1	-0.1	0	-0.1	-0.2	0.4	-0.2	-0.5	0	0.2	0	-0.2	0.5	-0.1	0.1	-0.1
K	0.1	0	0.2	-0.1	0	0	0	-0.1	0.4	-0.1	-0.3	-0.3	0.1	0	-0.1	-0.2	0.1	-0.6	-0.1	-0.1
R	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0	0.3	-0.2	-0.3	-0.1	0	0.1	0	-0.1	0.1	-0.1	0.2	0.1	0.5
H	-0.1	-0.1	-0.1	-0.2	0.2	0.1	0.2	-0.1	0	-0.1	-0.8	0.6	-0.3	0.5	-0.3	-0.1	-0.3	0.6	-0.2	-0.2
N	0	0.2	0.2	0	-0.1	0.1	0	-0.2	-0.3	0	-0.8	-0.7	0.1	1.5	-0.1	-0.1	-0.3	-0.2	-0.1	0
Q	-0.4	-0.2	0.1	0.7	0.3	0.4	-0.1	0.1	0.2	-0.1	-0.4	-0.4	-0.2	-0.3	0.2	-0.2	-0.3	0.6	0	-0.2
S	-0.1	-0.4	-0.6	0	0	-0.3	-0.9	0.1	0.2	0.1	0.3	-0.1	0.4	0.5	0.6	0.3	0.1	0.1	0.7	0.5
T	-0.3	-0.2	0.3	0.2	0.2	-0.5	0.4	-0.5	0	0.5	-0.3	0.2	0.4	-0.1	0.4	0.1	-0.6	0.2	0.6	0.2
G	0.3	0.6	-0.9	-0.9	-0.6	0.1	-0.1	0.3	-0.3	-0.5	0.5	0.2	0.3	0.4	0.1	0.5	0.4	1.1	-0.6	0.4
P	-0.2	-0.1	0.2	0	0.1	-0.1	0	0.1	0	-0.1	0.3	-0.6	0.2	-0.3	-0.1	-0.3	0	-0.1	0.5	-0.2
C	-0.2	0.2	0.2	0.1	0.3	-0.5	-0.1	0.3	-0.3	0.1	0.4	0.2	-0.1	-0.2	0.1	0	0	0.1	-0.3	0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0097	2	-0.4	0.8	0.9	1.1	-0.8	-0.8	-0.7	-1.1	-0.8	-1.5	-0.5	-1.4	-0.9	-0.2	1.9	1.5	1.1	-1	1.1
0101	0.4	-1.2	-1	0.1	-0.5	-1.3	-1.6	-0.8	0.4	0.4	0.7	0.8	0.2	0.9	-0.1	1	-0.2	2.4	-0.1	-0.7

Select residue pair below:

i_j	Score	Prob
0098_0101	0.862	0.82
0097_0101	0.637	0.50

Local Interactions:

i_j	Score	Prob
0100_0101	0.883	0.84

See all coupling residues
Download raw data

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