May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0093] and [E:0107]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 0.1 -0.1 -0.1 -0.3 -0.1 0.1 0.3 0.1 -0.2 0.1 -0.2 -0.1 -0.1 0.1 0 0.8 -0.3 0.2
F -0.3 0.4 -0.2 0 0.1 -0.3 -0.1 -0.3 0 0.1 0.1 -0.3 1.7 -0.1 -0.4 -0.1 0.1 -0.4 -0.1 -0.2
I -0.4 0.2 0.2 0.3 -0.2 -0.2 -0.1 0.2 0 -0.5 0.1 -0.6 -0.1 0.3 -0.1 0.3 -0.2 -0.2 -0.2 0.8
L -0.1 -0.2 -0.2 0.3 -0.2 0.5 -0.2 -0.5 -0.2 0.2 0.1 0.1 0.1 -0.2 0.1 0.2 0.5 0.2 -0.2 0.5
V -0.6 0.1 0.3 0.1 0.6 0.5 -0.1 0.5 -0.2 0 0 -0.2 0 -0.1 -0.2 0.1 -0.2 -0.1 -0.6 0.3
M 0.2 -0.2 0.2 0 0.2 0.1 0.2 -0.2 0 0 0.2 -0.3 -0.1 0 -0.2 -0.2 -0.1 -0.2 0.2 -0.1
W 0.2 -0.1 -0.2 -0.1 -0.2 -0.1 0 -0.2 -0.5 1 -0.1 0.4 -0.3 -0.4 0.9 0.3 -0.7 -0.2 -0.2 -0.1
Y 0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 0.3 -0.2 0 0.4 -0.1 -0.3 0.1 -0.4 -0.4 1.3 0
D 0.3 0.1 -0.3 0.3 -0.5 -0.2 -0.1 0.5 -0.7 0 0.4 0.4 -0.4 -0.4 -0.1 0 -0.1 1.1 0 -0.1
E -0.2 0.5 0.2 -0.1 0.1 0.3 -0.2 0.3 -0.8 -0.1 0.5 0.4 -0.4 -0.3 0 -0.2 0 0 -0.5 0.3
K 0.3 -0.3 -0.2 -0.3 0.2 -0.4 0 -0.1 0.5 0.3 0.1 -0.2 -0.5 0.2 0.1 0.2 0.5 0 -0.1 0.4
R 0.2 -0.1 -0.9 0 0 -0.6 0 -0.6 0.8 0.6 -0.4 -0.2 0 0.2 0.3 0.2 0.1 0.1 0.9 -0.5
H 0 -0.2 -0.5 -0.4 -0.1 -0.2 0.5 -0.3 0.5 -0.6 0.3 0.8 0.2 0.5 -0.4 0.2 -0.1 -0.1 -0.3 0.1
N 0 -0.3 0.5 0.2 0.2 0.2 -0.1 0.4 0.2 -0.6 0 -0.2 -0.6 0.4 0 0.2 0.7 -0.1 -0.2 -0.3
Q -0.1 -0.2 0 -0.4 -0.2 0.2 0 -0.3 0.5 0 -0.2 0.1 0.9 0.5 0.2 0.2 0.1 -0.5 0.5 -0.9
S 0.2 0.2 -0.2 -0.4 0.2 0.2 -0.3 0.7 0.2 -0.3 -0.1 0.2 -0.3 0.2 0.1 0.3 0.4 0.3 -0.5 -0.5
T 0 -0.4 -0.6 0.1 -0.4 0.3 -0.3 0.1 0.5 0.3 -0.1 0.1 -0.1 0.1 0.1 0 0.7 -0.1 -0.3 0.3
G 0.2 -0.1 0.3 0.2 -0.6 0.1 -0.2 -0.2 0.1 0.1 0.3 0.3 -0.3 -0.1 0 -0.3 0.4 0.1 0.7 -0.8
P -0.2 0.3 1.4 0.6 1.1 -0.2 0.2 -0.4 0 -0.6 -0.5 -0.5 0.1 0.5 0.2 -0.8 -0.5 -0.5 -0.5 -0.3
C 0.4 0 -0.5 0.1 -0.1 -0.2 0.1 -0.1 0.2 -0.1 -0.3 0.1 -0.1 0 0.3 -0.1 -0.4 0.2 0.7 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0093 -0.1 -0.6 -0.5 0.4 0.1 -0.5 -1.5 -0.3 0.4 0.5 0.4 0.7 -0.1 0.7 0.5 0.6 0.5 0.5 -0.5 -0.3
0107 0.3 -1.3 -0.8 -0.2 -0.3 -1 -1.7 -0.9 2.1 0.7 1.1 1.1 0 1.4 0.6 1.3 0.6 -0.2 -0.6 -1.1
Select residue pair below:
i_j Score Prob
0107_0110 1.534 1.00
0093_0107 0.895 0.85
0107_0114 0.808 0.76
0107_0112 0.646 0.52
Local Interactions:
i_j Score Prob
0107_0109 1.444 1.00
0107_0108 0.788 0.74
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0144 seconds.