OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [G:0093] and [I:0094]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	0	-0.1	0	0.3	0	0.3	0.3	0	0.1	-0.5	0	0.5	-0.4	-0.3	-0.2	0.3	-0.1	-0.1	0.6
F	0.1	0.1	0.3	0.8	0.4	1.2	-0.5	-0.3	-0.1	-0.2	-0.5	-0.7	-0.2	-0.2	0.7	-0.4	-0.9	0	-0.1	0.4
I	0.5	0.1	0.2	0.2	0	-0.3	-0.5	0	-0.1	-0.1	0.1	-0.7	-0.3	0	0.2	0.3	0.5	0.1	-0.1	-0.1
L	0.4	-0.1	0.2	0.2	0.3	-0.1	0.1	0.2	-0.3	-0.4	0.1	0	-0.1	0.1	-0.4	-0.1	0	0.8	-0.4	-0.1
V	0.8	0.3	0.1	0.2	-0.1	-0.6	-0.1	0.1	0.1	-0.1	-0.3	0	-0.5	-0.1	-0.5	0.1	-0.3	0.4	0.3	0.1
M	0.3	0.1	0.2	-0.2	0	0.2	0	0.5	-0.1	-0.2	0.2	-0.5	0.6	0	-0.2	-0.4	-0.5	-0.2	-0.1	0
W	-0.2	-0.9	0.4	0.9	-0.2	0.6	-0.1	-0.5	0	-0.1	-0.1	0.1	-0.2	-0.1	-0.2	-0.1	-0.4	-0.1	0	0.2
Y	0.3	-0.4	0	0.3	0.2	0	0.8	-0.1	-0.1	0.2	-0.1	-0.9	-0.4	-0.2	0	-0.5	0.5	0.1	-0.1	0.4
D	-0.3	0.4	-0.2	-0.1	0.2	0	0.6	-0.4	0.2	-0.1	0	0.2	-0.8	0.1	-0.1	0.3	-0.1	-0.1	0.3	0.1
E	-0.2	0.3	-0.4	-0.3	-0.2	0.1	0.5	0	0.2	0.4	0	0.4	-0.1	0.2	0.1	-0.3	-0.2	-0.1	-0.3	0.1
K	-0.1	0.1	0	-0.2	-0.1	-0.4	-0.1	0.7	-0.3	0.4	0.4	0.6	0.1	0.3	0.1	0.6	0.1	-0.3	-0.5	-0.2
R	0.6	0.3	-0.2	-0.3	0	-0.6	0.4	0.4	0.3	0.5	-0.6	0	0.3	0.2	-0.1	0	0.4	-0.3	-0.4	-0.3
H	0	0	0.2	0	0.4	-0.4	0.3	-0.2	-0.2	-0.1	-0.5	-0.1	0.3	0	-0.2	0.4	0.5	0.5	-0.3	-0.3
N	-0.5	0.2	0.2	0.1	0.2	0.1	-0.4	0.3	-0.1	0.6	0	-0.2	-0.6	0	0.3	-0.2	0.3	-0.5	1.3	0.3
Q	-0.7	0.4	0.1	-0.2	0	0	0.2	0.3	-0.1	-0.5	0.4	0.5	-0.3	0.6	0	-0.1	0.2	-0.3	-0.4	0.1
S	-0.4	-0.1	0.2	-0.1	0.2	0.4	-0.4	0	0.1	0.1	0.2	0.6	0.5	-0.8	0.2	-0.1	-0.1	0.1	0.1	-0.3
T	0.5	-0.3	0	0.2	0.1	0.5	-1	-0.2	-0.4	-0.8	0.6	0.7	0.5	0	0.2	0.2	0.2	-0.4	-0.2	0.2
G	-0.1	0.5	-0.1	-0.3	-0.3	-0.4	-0.4	-0.3	0	-0.2	0.2	0.5	0	-0.3	0.8	0.4	0.4	0.3	-0.1	-0.1
P	0	0.1	0.3	0.3	0.1	0.7	-0.2	0.1	-0.2	0	-0.6	-0.2	-0.3	0.2	-0.5	0	0.3	-0.4	0	-0.1
C	-0.4	0.5	-0.3	0	-0.1	-0.1	0.8	0.4	-0.1	0.1	0.5	-0.6	0.5	-0.2	-0.4	0	-0.2	0	0.1	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0093	-0.1	-0.6	-0.5	0.4	0.1	-0.5	-1.5	-0.3	0.4	0.5	0.4	0.7	-0.1	0.7	0.5	0.6	0.5	0.5	-0.5	-0.3
0094	0.6	1.3	1.6	2.2	1.7	0.3	-0.8	0.5	-1.2	-1	-0.6	-0.1	-0.5	-1.3	-0.6	0.1	0.4	-0.8	-1.5	0.1

Select residue pair below:

i_j	Score	Prob
0044_0094	0.714	0.63
0089_0094	0.690	0.59

Local Interactions:

i_j	Score	Prob
0094_0095	0.888	0.85
0093_0094	0.769	0.71
0094_0096	0.551	0.36

See all coupling residues
Download raw data

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