OPENSEQ.org -1516281329- GREMLIN Submission

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mep50

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Coupling matrix for [A:0084] and [D:0099]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.1	0	0.2	-0.1	-0.4	-0.2	0.2	0.2	0.1	-0.7	-0.6	-0.1	-0.1	-0.4	0.3	-0.2	0.2	0.8	0.1
F	0.3	0	-0.4	-0.3	0.7	-0.2	0.3	0.1	-0.7	-0.2	0.8	-0.1	-0.4	0.6	-0.2	-0.3	-0.7	1.1	-0.5	-0.1
I	-0.1	-0.4	0.2	0.2	-0.4	1.1	0.7	-0.2	0.2	-0.3	0.4	-0.2	-0.5	-0.2	-0.3	-0.3	0.2	-0.3	-0.3	0.5
L	-0.2	-0.1	0.2	0.6	0.3	1	-0.1	-0.1	0	0	0.9	0.2	-0.7	-0.8	-0.4	0.6	-0.3	-0.7	-0.1	0.5
V	-0.1	0	0.5	0	-0.7	1.2	-0.1	0.4	-0.5	0	0	-0.2	-0.3	-0.2	-0.3	0	0.2	-0.4	0.1	-0.1
M	-0.2	0.6	-0.1	0.8	0.2	-0.1	0.5	0.7	-0.1	-0.6	0.4	0.6	-0.1	0.3	-0.8	-0.5	-0.5	-0.3	-0.3	-0.1
W	1.1	0.5	-0.1	-0.3	-0.4	-1.2	0.9	-0.1	0.1	0	-0.4	-1.1	0.3	0.1	-0.5	0.5	0.8	0.6	-0.6	0.6
Y	0.6	0.7	-0.9	-0.3	-0.4	-1	-0.7	0.3	-0.1	0.4	-0.2	0.2	0.5	0.6	-0.1	0.3	0.4	0.9	-0.5	-0.4
D	0.5	-0.9	-0.1	0.5	0.2	-0.9	0	-0.7	-0.3	0.1	0.3	-0.4	-0.2	-0.5	1.1	0.5	0.4	-0.2	0.2	0.1
E	0.1	-0.1	-0.2	0.8	0.3	-0.1	0.1	-0.8	-0.8	0.8	-0.2	-0.1	-0.2	-0.2	-0.3	-0.1	0.1	0.1	-0.1	0.1
K	-0.4	0.9	-0.6	-0.3	0	-0.1	-0.4	0.3	0.2	-0.3	0.1	0	0.5	-0.2	1.1	-0.2	-0.3	0	0.1	-0.2
R	-0.1	0.4	-0.4	-0.3	-0.2	-0.1	-0.8	0	0.9	0.9	0.4	0.2	0.4	0	0.4	-0.4	0	-0.1	-0.2	-0.3
H	0.5	1.1	0.4	-0.4	-0.2	-0.8	-0.6	-0.3	0.5	0.2	-0.4	0.6	-0.3	-0.2	0.4	0.4	0.2	0.6	-0.9	-0.5
N	-0.1	-1	0.4	-0.4	0.1	-0.4	0.3	-0.4	1.5	0.3	0.5	-0.2	-0.2	0.4	0.5	0.5	0	0.1	-0.3	-0.3
Q	0.2	-0.8	0.2	0.1	0.7	-0.2	0.1	-0.6	0	0.3	-0.3	0.6	-0.3	0.1	0	0.1	-0.1	-0.4	0.1	0
S	-0.4	0.2	0.1	0.3	0.1	-0.2	1.1	1.1	0.2	-0.2	-0.6	-0.4	0.5	-0.1	-0.6	-0.3	-0.1	-0.1	0.5	-0.2
T	-0.2	0	0.8	0.3	0.1	0.5	-0.8	0.4	0	0.1	-0.1	0	0.3	0.2	-0.1	-0.1	0.1	-0.5	0.5	-0.7
G	0.1	-0.2	-0.3	0.6	0.1	0.5	-0.7	-0.2	-0.6	-0.9	-0.4	0.7	0.7	-0.1	0.5	-0.2	0	-0.1	0.5	-0.3
P	-0.1	-0.7	-0.3	-0.5	-0.3	0.1	-0.2	-0.1	-0.1	-0.1	-0.7	-0.1	-0.3	0.5	-0.2	0.2	0.2	0.1	0.2	0.2
C	-0.1	-0.3	-0.1	-0.8	-0.1	0.1	0	0.3	0.4	0.1	-0.2	0.1	0.1	0.3	0.3	0.2	-0.3	-0.4	-0.1	0.6

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0084	0	-0.3	0	0.7	0.1	-0.7	-0.8	0	-0.2	0.2	-0.2	0.5	0	0.8	-0.1	1.2	1.4	0.2	-0.9	-0.6
0099	0.8	0.2	-0.8	0.1	-0.4	-0.6	-0.7	0	0.8	0.5	0.2	0.3	-0.6	0.3	-0.2	1.2	0.3	0.8	-1.3	-1.1

Select residue pair below:

i_j	Score	Prob
0084_0099	1.437	1.00
0081_0099	0.834	0.79
0099_0127	0.572	0.39
0082_0099	0.531	0.33

Local Interactions:

i_j

Score

Prob

See all coupling residues
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