May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0082] and [A:0084]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 -0.2 0.2 0 0.1 0.7 -0.1 -0.6 -0.1 0.6 0.6 0.2 0.2 -0.4 -0.1 0 0 0.1 0
F -0.2 -0.8 -0.3 -0.4 -0.5 0 -0.8 0.1 0.1 0.4 0.1 -0.5 -0.1 1 0.5 0.4 0.1 1.1 0.3 -0.6
I -0.3 -0.9 0.7 0.4 -0.6 0 0.5 0.5 -0.6 -0.1 -0.2 -0.1 0.4 0.2 0 -0.2 0.1 -0.3 -0.3 0.1
L 0.2 -0.6 0.1 0.5 0.1 -0.1 -0.5 0.4 -0.7 -0.6 0.7 0 -0.2 0.5 0.2 -0.2 -0.1 0.6 -0.1 -0.2
V 0 0.1 0.2 -0.3 -0.8 0.1 0.5 0.8 -0.7 -0.1 -0.3 -0.3 -0.1 0.3 0.3 -0.1 -0.2 0.2 0.1 0.2
M -0.1 0.6 0 0.6 0.4 0.1 -0.9 0.2 -0.2 -0.1 0 -0.2 -0.1 -0.6 0 0.1 0.2 -0.5 -0.2 0
W -0.6 -0.5 -1 0.4 -0.9 0.4 0.7 -0.5 2.2 1.3 -0.7 0.5 -0.1 0.2 -0.1 -0.1 -0.2 -0.6 0 0.1
Y 0.1 -0.2 0 0.3 0 -0.3 -0.7 0.2 -0.3 -0.7 -0.3 0.8 0.1 0.1 -0.2 0.6 0.3 0.2 -0.2 0.6
D 0.4 0.2 0.6 0.2 0.2 -0.2 -0.5 0.5 0.1 1.2 -0.6 -0.7 -1 -0.1 0 -0.6 0.3 -0.3 0.3 0.2
E 0.5 -0.1 0.2 0.2 1 -0.4 1.2 -0.1 0 0.3 0 -0.2 -0.3 -0.4 0.1 -0.1 0.1 -0.5 -0.4 -0.5
K 0.2 0.1 0 -0.6 -0.2 0.1 -0.6 -0.7 -0.5 -0.3 0.8 -0.4 0 0.2 0.4 1 0.5 -0.1 0.4 -0.4
R 0.3 -0.5 -0.1 -0.4 -0.1 -0.3 0.7 -0.9 0.8 -0.2 -0.3 -0.7 0.8 0.2 -0.1 0.2 -0.1 1 0 -0.1
H -0.2 -0.1 0.3 0.7 -0.1 0.1 -0.5 0.1 -0.3 0.1 -0.3 0.1 0.4 -0.1 -0.5 0 0.3 0.1 -0.3 0.1
N 0.4 0.7 0.5 -0.2 1.3 -0.5 -0.6 -0.1 -0.1 -0.4 -0.1 -0.5 -0.6 -0.6 0.1 0.3 0.3 0.3 0.3 -0.1
Q -0.2 0.2 0.4 -0.2 0.3 0 0.4 -0.5 0.3 -0.5 0.4 0.1 0.1 0.6 -0.2 -0.5 -0.1 -0.1 -0.2 0.1
S 0 0.1 0.4 0 0.1 -0.7 -0.2 -0.1 0.6 0.9 0.1 0.3 -0.5 0 0 0.1 -0.2 0 -0.1 -0.2
T 0.3 0.1 -0.9 -0.3 -0.5 0.1 0.4 0.5 -0.5 -0.1 -0.3 0.8 0.6 0 -0.3 0.2 0.1 -0.2 0.3 0
G 0.3 0.6 -0.3 -0.4 0.3 -0.2 0.8 -0.3 -0.1 0.1 0.1 -0.2 0.3 -0.4 0.1 0.3 -0.1 0 -0.2 0.5
P 0.4 0.3 0.2 0.3 0.4 -0.2 0.5 0.8 -0.5 -0.9 0 0.4 0.5 -0.3 -0.1 -0.1 0.1 -0.5 -0.4 -0.1
C -0.8 1.3 -0.6 0 -0.4 0.8 -0.2 0 0.6 -0.7 0 -0.1 -0.7 0.6 -0.2 0 0.1 -0.2 0.3 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0082 1 -0.5 -0.7 -0.2 -0.3 -1.3 -0.2 -0.1 0.4 0.4 -0.2 0.2 -0.8 -0.2 -0.3 1.2 0.5 1.3 1.4 -0.7
0084 0 -0.3 0 0.7 0.1 -0.7 -0.8 0 -0.2 0.2 -0.2 0.5 0 0.8 -0.1 1.2 1.4 0.2 -0.9 -0.6
Select residue pair below:
i_j Score Prob
0084_0099 1.437 1.00
0084_0129 0.720 0.64
0032_0084 0.612 0.46
0081_0084 0.533 0.33
Local Interactions:
i_j Score Prob
0084_0085 0.664 0.55
0082_0084 0.585 0.41
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.02 seconds.